RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RAB19A4D1S5 217 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 OR2W5A6NFC9 320 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 NUDT19A8MXV4 375 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 LGALS8O00214 317 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 GOSR2O14653 212 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 IMPA2O14732 288 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 EIF4E2O60573 245 aaKnown RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 NKX2-2O95096 273 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ZFPL1O95159 310 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ONECUT2O95948 504 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SPI1P17947 270 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ACTBP60709 375 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 PRPS1P60891 318 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 B2MP61769 119 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ACTG1P63261 375 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 LTBQ06643 244 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 PCGF3Q3KNV8 242 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 OR7E24Q6IFN5 339 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 LRRC69Q6ZNQ3 347 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 CA13Q8N1Q1 262 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 MUC20Q8N307 709 aaPredicted RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 KCNRGQ8N5I3 272 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 OR5M1Q8NGP8 315 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 OR4K13Q8NH42 304 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 TNFAIP8L1Q8WVP5 186 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ST8SIA2Q92186 375 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 RGP1Q92546 391 aaPredicted RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 MARC2Q969Z3 335 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 OR1F2PQ96R84 312 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 MS4A7Q9GZW8 240 aaPredicted RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC25A18Q9H1K4 315 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SLCO5A1Q9H2Y9 848 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 PIGMQ9H3S5 423 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 FLRT3Q9NZU0 649 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 ATPIF1Q9UII2 106 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 FBXO9Q9UK97 447 aaPredicted RBP10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SPACA6W5XKT8 324 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 FREM2Q5SZK8 3169 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 SPTBP11277 2137 aa10.31□□□□□ -0.76
TSPAN1-201ENST00000372003 C21orf140B9A014 251 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 PEX12O00623 359 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF254O75437 659 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 KLF7O75840 302 aaPredicted RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 APOC3P02656 99 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ITGB2P05107 769 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ITPKBP27987 946 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 PSMB10P40306 273 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 NAA10P41227 235 aaPredicted RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ACAA2P42765 397 aaKnown RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 HCCSP53701 268 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 PSMD4P55036 377 aaKnown RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ALG10BQ5I7T1 473 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 LIN54Q6MZP7 749 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 PGAP1Q75T13 922 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 SERPINA12Q8IW75 414 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 OR5AK2Q8NH90 309 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 GPR148Q8TDV2 347 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 GPR87Q9BY21 358 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 BARX1Q9HBU1 254 aaPredicted RBP10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 HPF1Q9NWY4 346 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 MKL2Q9ULH7 1088 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF337Q9Y3M9 751 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 FRYQ5TBA9 3013 aa10.3□□□□□ -0.76
TSPAN1-201ENST00000372003 GGT3PA6NGU5 568 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM200CA6NKL6 621 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 VSTM2BA6NLU5 285 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM212A6NML5 194 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 PHYHO14832 338 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 EFSO43281 561 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 LDB3O75112 727 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RLN1P04808 185 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ANXA2P07355 339 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 HEXBP07686 556 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 RNH1P13489 461 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 HLA-GP17693 338 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 PTNP21246 168 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CNR1P21554 472 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 FOLR3P41439 243 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 NANOS3P60323 173 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 PLAURQ03405 335 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 ZMYND11Q15326 602 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TRMT12Q53H54 448 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM229BQ8NBD8 167 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 OR52B4Q8NGK2 314 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 OR10K1Q8NGX5 313 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 LIPHQ8WWY8 451 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 GCDHQ92947 438 aaPredicted RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 LRRC46Q96FV0 321 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 SPSB2Q99619 263 aa10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 LMF2Q9BU23 707 aaKnown RBP10.29□□□□□ -0.76
TSPAN1-201ENST00000372003 CRB3Q9BUF7 120 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms