RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SLC25A10Q9UBX3 287 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 MOKQ9UQ07 419 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 A0A1W2PNV4 684 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 LIPT2A6NK58 231 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 C11orf98E9PRG8 122 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 J3QRE1 110 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 XKRYO14609 159 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 PLA2G1BP04054 148 aaKnown RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 CD99P14209 185 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 COX6B1P14854 86 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 SPI1P17947 270 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 AHCYP23526 432 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 CALRP27797 417 aaKnown RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 LIPAP38571 399 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 RGS6P49758 472 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 RPL27P61353 136 aaKnown RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 MYBPHQ13203 477 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 ZMAT1Q5H9K5 638 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 TMPRSS11AQ6ZMR5 421 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 OR4F15Q8NGB8 312 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 PERPQ96FX8 193 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 MARS2Q96GW9 593 aaKnown RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 ARL5BQ96KC2 179 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 OPALINQ96PE5 141 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 DDOQ99489 341 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 ANKRD10Q9NXR5 420 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 CLEC2DQ9UHP7 191 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 BOKQ9UMX3 212 aaPredicted RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 MRPS18CQ9Y3D5 142 aaKnown RBP7.77□□□□□ -1.17
TPM3-213ENST00000368545 KIAA1549Q9HCM3 1950 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 ABCA12Q86UK0 2595 aa7.77□□□□□ -1.17
TPM3-213ENST00000368545 OR6C68A6NDL8 312 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 GJE1A6NN92 205 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 TSPAN4O14817 238 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 SEC14L5O43304 696 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 SERPINI2O75830 405 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 GLCEO94923 617 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 SBK2P0C263 348 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 LIMS3P0CW19 117 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 LIMS4P0CW20 117 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CLUP10909 449 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CNR1P21554 472 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CENPAP49450 140 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 DAP3P51398 398 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 BDH1Q02338 343 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ACSM1Q08AH1 577 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CTF1Q16619 201 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 MESTQ5EB52 335 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 RAET1LQ5VY80 246 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 TUBA3EQ6PEY2 450 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 SHFQ7M4L6 423 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 GALNT16Q8N428 558 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ARIH2OSQ8N7S6 290 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ATP6V1C2Q8NEY4 427 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 OR2T4Q8NH00 348 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ZNF519Q8TB69 540 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 MRPL48Q96GC5 212 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 GNRHR2Q96P88 292 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CNN2Q99439 309 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 FAM173AQ9BQD7 235 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ADGRL4Q9HBW9 690 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ERRFI1Q9UJM3 462 aaPredicted RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 ZNF346Q9UL40 294 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 TRAPPC4Q9Y296 219 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CAB39Q9Y376 341 aaPredicted RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 NOX1Q9Y5S8 564 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 DAPL1A0PJW8 107 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 A6NIZ1 184 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 C12orf71A8MTZ7 269 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 G3V3Y1 287 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 AKAP8O43823 692 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 AIREO43918 545 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 EFNA2O43921 213 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 PMS2P2O95744 297 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 GYPBP06028 91 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CDKN2AP42771 156 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 DNASE1L1P49184 302 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 DIO1P49895 249 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 RAP1BP61224 184 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ACTA2P62736 377 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 RAP1AP62834 184 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ACTG2P63267 376 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ACKR1Q16570 336 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 RNF151Q2KHN1 245 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 CCDC92Q53HC0 331 aaPredicted RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 PAQR6Q6TCH4 344 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 HDDC2Q7Z4H3 204 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 GALNTL5Q7Z4T8 443 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 OR5B2Q96R09 309 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ALG8Q9BVK2 526 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 RPRD1BQ9NQG5 326 aaKnown RBP7.76□□□□□ -1.17
TPM3-213ENST00000368545 ASB6Q9NWX5 421 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 NDUFB11Q9NX14 153 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 B4GALT7Q9UBV7 327 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 SEC14L4Q9UDX3 406 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 FREM2Q5SZK8 3169 aa7.76□□□□□ -1.17
TPM3-213ENST00000368545 LRRC3CA6NJW4 275 aa7.75□□□□□ -1.17
TPM3-213ENST00000368545 NPIPA5E9PKD4 350 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms