RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TCN2P20062 427 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 F2RP25116 425 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 GDI1P31150 447 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 KIR3DL2P43630 455 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 CSNK1EP49674 416 aaKnown RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 CDH17Q12864 832 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR7A5Q15622 319 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 REEP3Q6NUK4 255 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 CMTM1Q8IZ96 169 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 LGI3Q8N145 548 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 GTPBP8Q8N3Z3 284 aaPredicted RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF615Q8N8J6 731 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR8U1Q8NH10 309 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 C15orf40Q8WUR7 153 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 ESR2Q92731 530 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF578Q96N58 590 aaPredicted RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 SPNS1Q9H2V7 528 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 GPATCH2LQ9NWQ4 482 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 HRASLS2Q9NWW9 162 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 LGALS13Q9UHV8 139 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 RRP15Q9Y3B9 282 aaKnown RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 TSSC4Q9Y5U2 329 aaPredicted RBP2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 TMEM14AQ9Y6G1 99 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 IKBKGQ9Y6K9 419 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 PLA2R1Q13018 1463 aa2.38□□□□□ -2.03
RNU6-560P-201ENST00000364007 FTH1P02794 183 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 EIF4EP06730 217 aaKnown RBP2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR56A5P0C7T3 313 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 PRMT2P55345 433 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 SRSF5Q13243 272 aaKnown RBP2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 ORMDL2Q53FV1 153 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 SMUG1Q53HV7 270 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 C9orf135Q5VTT2 229 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 RAET1LQ5VY80 246 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 MBOAT1Q6ZNC8 495 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 SHISA6Q6ZSJ9 500 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 IQCKQ8N0W5 287 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 RNF182Q8N6D2 247 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 METTL13Q8N6R0 699 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR10AD1Q8NGE0 317 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR2A1Q8NGT9 310 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 COQ8AQ8NI60 647 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF461Q8TAF7 563 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 PIFOQ8TCI5 191 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 MRGPRFQ96AM1 343 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 EEF1AKMT3Q96AZ1 226 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 COL21A1Q96P44 957 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF382Q96SR6 550 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 CCDC77Q9BR77 488 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 NOTCH2Q04721 2471 aa2.37□□□□□ -2.03
RNU6-560P-201ENST00000364007 SMKR1H3BMG3 65 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 AP3B1O00203 1094 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 RDH16O75452 317 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 CD3GP09693 182 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 GGT1P19440 569 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SSTR5P35346 364 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SLC1A1P43005 524 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 TNNT2P45379 298 aaPredicted RBP2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 CX3CR1P49238 355 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 UBE2NP61088 152 aaKnown RBP2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 STXBP1P61764 594 aaKnown RBP2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 TGM3Q08188 693 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SELENBP1Q13228 472 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 IRF4Q15306 451 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 HSP90AB3PQ58FF7 597 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 ARMC12Q5T9G4 340 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 GPR107Q5VW38 600 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SAXO2Q658L1 398 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 LRRC66Q68CR7 880 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 C22orf42Q6IC83 251 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SLC16A14Q7RTX9 510 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 TMEM150AQ86TG1 271 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR4A4PQ8NGN8 299 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 LRRC29Q8WV35 223 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 CAPSLQ8WWF8 208 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 ECHDC3Q96DC8 303 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 SEH1LQ96EE3 360 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 DNAJC1Q96KC8 554 aaKnown RBP2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 TIMM17AQ99595 171 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 EDA2RQ9HAV5 297 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 NMRK1Q9NWW6 199 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 PTTG3PQ9NZH4 202 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 GGA2Q9UJY4 613 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 VANGL2Q9ULK5 521 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 RABL2BQ9UNT1 228 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
RNU6-560P-201ENST00000364007 A0A0U1RQV1 116 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 A0A1B0GW55 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 C9JVG2 144 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 SIRPB1O00241 398 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 EIF4E2O60573 245 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 FKBP6O75344 327 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 ERLIN1O75477 346 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 767.4 ms