RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 BTCP35070 178 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 MMP16P51512 607 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 AGFG1P52594 562 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 AP3S2P59780 193 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 TCF15Q12870 199 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 CAMK2DQ13557 499 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 LRFN4Q6PJG9 635 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 DNAAF1Q8NEP3 725 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 FCAMRQ8WWV6 532 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 ASB5Q8WWX0 329 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 SLAMF6Q96DU3 332 aa16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 ZNF275Q9NSD4 429 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-203ENST00000359895 CACNA1HO95180 2353 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 GJE1A6NN92 205 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 SLC17A2O00624 439 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 KRT33AO76009 404 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 VAMP5O95183 116 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 SRP9P49458 86 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 NUBP1P53384 320 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 RPS15P62841 145 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 CSNK2A1P68400 391 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 KLF9Q13886 244 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 RAB11BQ15907 218 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 KCNMB1Q16558 191 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 ZFP69Q49AA0 526 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 RNASE12Q5GAN4 147 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 BCL2L15Q5TBC7 163 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 RAET1LQ5VY80 246 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 GLT8D1Q68CQ7 371 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 H3F3CQ6NXT2 135 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 RHOUQ7L0Q8 258 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 PRSS45Q7RTY3 260 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 TIPARPQ7Z3E1 657 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 IZUMO1Q8IYV9 350 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 OR2AJ1Q8NGZ0 328 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 NIPAL2Q9H841 368 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 SLC17A5Q9NRA2 495 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 CENPMQ9NSP4 180 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 DDX28Q9NUL7 540 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 FBXL3Q9UKT7 428 aa16.29■□□□□ 0.2
PDLIM7-203ENST00000359895 PHF3Q92576 2039 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 NAP1L6A6NFF2 107 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 ZNF814B7Z6K7 855 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 ZIC3O60481 467 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 P04436 131 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 GSTT2BP0CG30 244 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 CD59P13987 128 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 ARSBP15848 533 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 IGFBP3P17936 291 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 GDNFP39905 211 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 DNASE1L1P49184 302 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 PTH2RP49190 550 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 RAB25P57735 213 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 RPS18P62269 152 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 H3F3AP84243 136 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 HIST3H3Q16695 136 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 NAXDQ8IW45 347 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 OR13C3Q8NGS6 347 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 PPP1R14AQ96A00 147 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 JSRP1Q96MG2 331 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 GNRHR2Q96P88 292 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 PIGQQ9BRB3 760 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 POU2F3Q9UKI9 436 aa16.28■□□□□ 0.2
PDLIM7-203ENST00000359895 LOC107986453A0A1B0GWG9 222 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 OR2M5A3KFT3 312 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 H3BSH0 61 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 ACOT7O00154 380 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 SERPINA7P05543 415 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 CD37P11049 281 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 CDK2P24941 298 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 RAC1P63000 192 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 SNTB2Q13425 540 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 POU4F3Q15319 338 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 CCDC157Q569K6 752 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 CDH24Q86UP0 819 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 ZNF486Q96H40 463 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 SPRY4Q9C004 299 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 OR2B2Q9GZK3 357 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 AUNIPQ9H7T9 357 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 MOB1AQ9H8S9 216 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 SEC61A2Q9H9S3 476 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 POLR1DQ9Y2S0 133 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 N6AMT1Q9Y5N5 214 aa16.27■□□□□ 0.2
PDLIM7-203ENST00000359895 XRCC3O43542 346 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 DNPH1O43598 174 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 RAD1O60671 282 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 GLSO94925 669 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TCRBP04435 133 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 SRD5A2P31213 254 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 RAG2P55895 527 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TAS2R20P59543 309 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 RRAS2P62070 204 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 TOMM20Q15388 145 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CDCP2Q5VXM1 449 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 FAM166AQ6J272 317 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 CORO6Q6QEF8 472 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 SERPINA12Q8IW75 414 aa16.26■□□□□ 0.19
PDLIM7-203ENST00000359895 ESX1Q8N693 406 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms