RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 MRM2Q9UI43 246 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 GRIP1Q9Y3R0 1128 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 CSMD1Q96PZ7 3565 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 CELSR2Q9HCU4 2923 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 TRDV1A0A1B0GX56 115 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 PSMD9O00233 223 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 RGS9O75916 674 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 HLA-DPB1P04440 258 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CD1AP06126 327 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 GALP22466 123 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 PCSK6P29122 969 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 UGT2B10P36537 528 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CRYBB2P43320 205 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 LSM6P62312 80 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 SIRPAP78324 504 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 ROM1Q03395 351 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF544Q6NX49 715 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 DCXRQ7Z4W1 244 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 KRT77Q7Z794 578 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF679Q8IYX0 411 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CPT1CQ8TCG5 803 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 SMIM19Q96E16 107 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 GPR137Q96N19 417 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 AMELYQ99218 206 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CENPOQ9BU64 300 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 TMED9Q9BVK6 235 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 RBM24Q9BX46 236 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 MROQ9BYG7 248 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 LINC00470Q9BZP3 86 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 DCSTAMPQ9H295 470 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 SLCO5A1Q9H2Y9 848 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 C1orf198Q9H425 327 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 SLCO1C1Q9NYB5 712 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 LUZP4Q9P127 313 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 CLCF1Q9UBD9 225 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 GSTK1Q9Y2Q3 226 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 SIRT4Q9Y6E7 314 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 GTF3C1Q12789 2109 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 DOCK7Q96N67 2140 aa12.22□□□□□ -0.45
PDLIM5-203ENST00000359265 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 A0A1B0GTH9 108 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 GPRIN2O60269 458 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF254O75437 659 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 UPK3AO75631 287 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 KRT33AO76009 404 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 RPP14O95059 124 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 YES1P07947 543 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF182P17025 639 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 COL8A1P27658 744 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 FGF9P31371 208 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 CDAP32320 146 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 NTF4P34130 210 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 PSMB10P40306 273 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 SERPINB10P48595 397 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 RIDAP52758 137 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 MRPS34P82930 218 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 SLC3A1Q07837 685 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 SF3B4Q15427 424 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 STK11Q15831 433 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 SGCAQ16586 387 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 LIPNQ5VXI9 398 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 CD200R1LQ6Q8B3 271 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 RPTNQ6XPR3 784 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 MS4A15Q8N5U1 240 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 Q8NA96 180 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 RPS4Y2Q8TD47 263 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 ST7LQ8TDW4 575 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 TMEM203Q969S6 136 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 ELOVL3Q9HB03 270 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 GLRX2Q9NS18 164 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 TXNL4BQ9NX01 149 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 CYB5R1Q9UHQ9 305 aa12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 NCOA6Q14686 2063 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-203ENST00000359265 GABRPO00591 440 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 SERPINA3P01011 423 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 RNF224P0DH78 156 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 NPR2P20594 1047 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 AGTR1P30556 359 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 TUBA1BP68363 451 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 FABP5Q01469 135 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 ALKBH1Q13686 389 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 DGUOKQ16854 277 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 DEGS2Q6QHC5 323 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 PLXDC2Q6UX71 529 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 TUBA1AQ71U36 451 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 ADGRE4PQ86SQ3 457 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 DYNC2LI1Q8TCX1 351 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 APH1AQ96BI3 265 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 SLAMF6Q96DU3 332 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms