RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 STAC2Q6ZMT1 411 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC16A12Q6ZSM3 486 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 VRK3Q8IV63 474 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TTC9Q92623 222 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 LHX4Q969G2 390 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 IKZF5Q9H5V7 419 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 MOB1AQ9H8S9 216 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZC3H12DA2A288 527 aaKnown RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC35E2P0CK97 266 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 BIDP55957 195 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TOMM34Q15785 309 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF740Q8NDX6 193 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR52B4Q8NGK2 314 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 DUSP22Q9NRW4 184 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 LOC107986453A0A1B0GWG9 222 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 GPR31O00270 319 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 MAN2B1O00754 1011 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 NID1P14543 1247 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 KCNJ3P48549 501 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 PCK2Q16822 640 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ACOT6Q3I5F7 207 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ELFN2Q5R3F8 820 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 CXorf58Q96LI9 332 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 HEYLQ9NQ87 328 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 LAMP3Q9UQV4 416 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 HSD17B6O14756 317 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 RPS15P62841 145 aaKnown RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC35A1P78382 337 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ABHD17CQ6PCB6 329 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ST6GAL2Q96JF0 529 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 MAP3K3Q99759 626 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF385DQ9H6B1 395 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEM184BQ9Y519 407 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 PRSS38A1L453 326 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 RAB27BO00194 218 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 NDUFB6O95139 128 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 UTS2O95399 124 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 GPNMBQ14956 572 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 MPPED2Q15777 294 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TCTN3Q6NUS6 607 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC16A11Q8NCK7 471 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 NUDT8Q8WV74 236 aa11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEFF2Q9UIK5 374 aaPredicted RBP11.64□□□□□ -0.55
SYNCRIP-201ENST00000355238 ANKUB1A6NFN9 424 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 PLPP1O14494 284 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 DOK2O60496 412 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZFAND5O76080 213 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC2A10O95528 541 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 CLDN17P56750 224 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ARHGAP11BQ3KRB8 267 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ALKAL1Q6UXT8 129 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR2W3Q7Z3T1 314 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ADIPOR2Q86V24 386 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 RPUSD4Q96CM3 377 aaKnown RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 LRP6O75581 1613 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 IGLV3-10A0A075B6K4 115 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 PRAMEF4O60810 478 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 NXPH3O95157 252 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 POU3F2P20265 443 aaPredicted RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 TNFSF4P23510 183 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 CLDN2P57739 230 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 PTOV1Q86YD1 416 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 HS3ST2Q9Y278 367 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 PYCARD-AS1I3L0S3 204 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 RRASP10301 218 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 EPHA2P29317 976 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 COL9A2Q14055 689 aaPredicted RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 GUK1Q16774 197 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEM81Q6P7N7 255 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC38A9Q8NBW4 561 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 LINC00597Q9H2U6 94 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 BANF2Q9H503 90 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 BCL2L10Q9HD36 194 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 MTCH1Q9NZJ7 389 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 MYH9P35579 1960 aaKnown RBP11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 GPX8Q8TED1 209 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 A0A0B4J203 849 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 K7EQM0 130 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 HCRTR1O43613 425 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 UBE2G2P60604 165 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 KIAA1958Q8N8K9 716 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR5M1Q8NGP8 315 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC35A4Q96G79 324 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZDHHC11Q9H8X9 412 aa11.63□□□□□ -0.55
SYNCRIP-201ENST00000355238 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms