RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NDUFS1P28331 727 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 MPGP29372 298 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 MTNR1AP48039 350 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 AP3S2P59780 193 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 PNLIPRP3Q17RR3 467 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SLC16A14Q7RTX9 510 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 C5orf24Q7Z6I8 188 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 GNPDA2Q8TDQ7 276 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 FAM210BQ96KR6 192 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 OR51I1Q9H343 314 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 DKKL1Q9UK85 242 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 CES1P1Q9UKY3 287 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 SIT1Q9Y3P8 196 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SPIN1Q9Y657 262 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 TBC1D3KA0A087X1G2 549 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 OR6C76A6NM76 312 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 M0R143 59 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 CYR61O00622 381 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 ITGA5P08648 1049 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 GKN3PP0CG01 181 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 UBBP0CG47 229 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 DLSTP36957 453 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SRP9P49458 86 aaKnown RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 MANFP55145 182 aaKnown RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 RPS27AP62979 156 aaKnown RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 UBA52P62987 128 aaKnown RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 ZNF234Q14588 700 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 NSUN5P2Q63ZY6 315 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 LYPD4Q6UWN0 246 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SYT13Q7L8C5 426 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SPICQ8N5J4 248 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 OR56B4Q8NH76 319 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SORCS1Q8WY21 1168 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 LMAN1LQ9HAT1 526 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 CA10Q9NS85 328 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 OPN4Q9UHM6 478 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 H3BN98 237 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 TP53I11O14683 189 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 HYAL3O43820 417 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 OR2A4O95047 310 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 APODP05090 189 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SDHBP21912 280 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 ACKR3P25106 362 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 ADH6P28332 368 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SOX18P35713 384 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 SHC2P98077 582 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 TMEM52BQ4KMG9 183 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 EXOSC6Q5RKV6 272 aaKnown RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 FAHD2BQ6P2I3 314 aaPredicted RBP9.8□□□□□ -0.84
SND1-201ENST00000354725 AMER3Q8N944 861 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 FAHD2AQ96GK7 314 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 OR2A7Q96R45 310 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 EGLN3Q9H6Z9 239 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 FKRPQ9H9S5 495 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 MMP17Q9ULZ9 603 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 NCOR1O75376 2440 aa9.8□□□□□ -0.84
SND1-201ENST00000354725 FXYD6-FXYD2A0A087WZ82 144 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 C4orf51C9J302 202 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 BNIP3LO60238 219 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 EIF4E2O60573 245 aaKnown RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 PPIAP62937 165 aaKnown RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 ZNF793Q6ZN11 406 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 OR5AR1Q8NGP9 310 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 CYB5D2Q8WUJ1 264 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 GAL3ST3Q96A11 431 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 FXYD6Q9H0Q3 95 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 TRAPPC13A5PLN9 417 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 A6NNC1 897 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 SAP30O75446 220 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 IFNA17P01571 189 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 DCNP07585 359 aaKnown RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 ALPPL2P10696 532 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 IGFALSP35858 605 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 F2RL1P55085 397 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 RGS8P57771 180 aaPredicted RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 SRSF3P84103 164 aaKnown RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 WDR88Q6ZMY6 472 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 CYB561A3Q8NBI2 242 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 OR5D16Q8NGK9 328 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 OR5R1Q8NH85 324 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 MALSU1Q96EH3 234 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 RERGLQ9H628 205 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 ZNF726A6NNF4 738 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 HRKO00198 91 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 EEF1E1O43324 174 aaKnown RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 SFTPBP07988 381 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 NR2F6P10588 404 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 HTR1FP30939 366 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 CEACAM8P31997 349 aaPredicted RBP9.79□□□□□ -0.84
SND1-201ENST00000354725 UBE2KP61086 200 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
SND1-201ENST00000354725 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms