RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 A0A1B0GX78 115 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SLC22A23A1A5C7 686 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 HTR3EA5X5Y0 456 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 LIPT2A6NK58 231 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ZNF716A6NP11 495 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 B4DGG1 531 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 D6RAR5 112 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 F5H697 171 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 GNGT2O14610 69 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 HPGDSO60760 199 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ZNF254O75437 659 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 CDC123O75794 336 aaPredicted RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 GLSO94925 669 aaPredicted RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 MPZL1O95297 269 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 PTTG1O95997 202 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 GYPBP06028 91 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ZNF883P0CG24 379 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 NR2F1P10589 423 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 CTLA4P16410 223 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 NPR2P20594 1047 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 NTSP30990 170 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SOAT1P35610 550 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 BUD31P41223 144 aaPredicted RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 CLDN20P56880 219 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ZNF45Q02386 682 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 UNC119Q13432 240 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ELOCQ15369 112 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 GPR68Q15743 365 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 INAQ16352 499 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 HLA-BQ31612 363 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SLC35D3Q5M8T2 416 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 C22orf42Q6IC83 251 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 MZT2AQ6P582 158 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ULK3Q6PHR2 472 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SLC25A47Q6Q0C1 308 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SLC22A25Q6T423 547 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ZNF813Q6ZN06 617 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 NRARPQ7Z6K4 114 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 SLC22A16Q86VW1 577 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 OOSP2Q86WS3 158 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 METTL27Q8N6F8 245 aaPredicted RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 OR2T33Q8NG76 320 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 OR11H7Q8NGC8 314 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 FANK1Q8TC84 345 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 OSTF1Q92882 214 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 MYDGFQ969H8 173 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 NMNAT3Q96T66 252 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 CCDC32Q9BV29 185 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 EDEM2Q9BV94 578 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ABCG5Q9H222 651 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ADNPQ9H2P0 1102 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 GALNT9Q9HCQ5 603 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ADAP2Q9NPF8 381 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 INPP5EQ9NRR6 644 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 MRPL39Q9NYK5 338 aaKnown RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 CYB5R1Q9UHQ9 305 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 FBXL3Q9UKT7 428 aa2.03□□□□□ -2.09
VPS54-202ENST00000354504 ELF5Q9UKW6 265 aaPredicted RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 EXOSC1Q9Y3B2 195 aaKnown RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 RPL36Q9Y3U8 105 aaKnown RBP2.03□□□□□ -2.09
VPS54-202ENST00000354504 MXRA5Q9NR99 2828 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 CCDC187A0A096LP49 1063 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 IGHV3-20A0A0C4DH32 117 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 A0A1W2PPH5 198 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 A0A1W2PQ09 198 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 OR2M5A3KFT3 312 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 ANKUB1A6NFN9 424 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 DUXAA6NLW8 204 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 CEACAM18A8MTB9 384 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 C12orf71A8MTZ7 269 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 C17orf105B2RV13 164 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 TMEM150CB9EJG8 249 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 F5H0A9 414 aaPredicted RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 BCAT2O15382 392 aaPredicted RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 ZNF208O43345 1280 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 OR10H3O60404 316 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 GLCEO94923 617 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 CH25HO95992 272 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 ALOX5P09917 674 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 RNH1P13489 461 aaKnown RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 RPS2P15880 293 aaKnown RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 TNNI3P19429 210 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 WT1P19544 449 aaPredicted RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 CRYGSP22914 178 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 MPZP25189 248 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 MMP15P51511 669 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 ZNF84P51523 738 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 FBXW4P57775 412 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 RGS1Q08116 209 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 BIKQ13323 160 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 ZNF846Q147U1 533 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 CCDC58Q4VC31 144 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 FAM90A2PQ658T7 463 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 CORO6Q6QEF8 472 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 RABEPKQ7Z6M1 372 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 OR10G6Q8NH81 332 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 LMX1AQ8TE12 382 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 PAQR8Q8TEZ7 354 aa2.02□□□□□ -2.09
VPS54-202ENST00000354504 SNRNP27Q8WVK2 155 aaKnown RBP2.02□□□□□ -2.09
VPS54-202ENST00000354504 OMA1Q96E52 524 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms