RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ASB5Q8WWX0 329 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ASB17Q8WXJ9 295 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 THRSPQ92748 146 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 GHSRQ92847 366 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ABTB1Q969K4 478 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 RNF166Q96A37 237 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 KLHL15Q96M94 604 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ZNF587Q96SQ5 575 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 INTS14Q96SY0 518 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 TPK1Q9H3S4 243 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ZCCHC4Q9H5U6 513 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 WDR76Q9H967 626 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 SH2D2AQ9NP31 389 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ABCB9Q9NP78 766 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ABCB10Q9NRK6 738 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 SERINC1Q9NRX5 453 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 ACOXLQ9NUZ1 547 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 MED11Q9P086 117 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 GNG8Q9UK08 70 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 NPIPA1Q9UND3 350 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 B3GALT5Q9Y2C3 310 aa7.29□□□□□ -1.24
CD44-205ENST00000352818 CHCHD2Q9Y6H1 151 aaPredicted RBP7.29□□□□□ -1.24
CD44-205ENST00000352818 IGLV1-36A0A0B4J1U3 117 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 LIPT2A6NK58 231 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 CENPBD1B2RD01 187 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 C11orf98E9PRG8 122 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 MS4A18H0YCH9 400 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 DCTN6O00399 190 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ARHGEF9O43307 516 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ITGA10O75578 1167 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 UPK3AO75631 287 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ZNF432O94892 652 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ALOX5APP20292 161 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 MAPK3P27361 379 aaPredicted RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 APEX1P27695 318 aaKnown RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 GTF2E2P29084 291 aaKnown RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 ACVR1BP36896 505 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 EIF1P41567 113 aaKnown RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 RPS11P62280 158 aaKnown RBP eCLIP7.28□□□□□ -1.24
CD44-205ENST00000352818 ROM1Q03395 351 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 SLC3A1Q07837 685 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 SELENBP1Q13228 472 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 MS4A18Q3C1V0 323 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ACSM3Q53FZ2 586 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 KRTCAP3Q53RY4 240 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 YIF1BQ5BJH7 314 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ZMAT1Q5H9K5 638 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 C3orf33Q6P1S2 294 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 SFXN4Q6P4A7 337 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 POMZP3Q6PJE2 187 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 DNM1P34Q6PK57 102 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 NDUFAF7Q7L592 441 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 HDDC2Q7Z4H3 204 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 CEACAM19Q7Z692 300 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 LRRC28Q86X40 367 aaPredicted RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 OR6V1Q8N148 313 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ZNF454Q8N9F8 522 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 POC5Q8NA72 575 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 POC1BQ8TC44 478 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ASB10Q8WXI3 467 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ZBTB8AQ96BR9 441 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 SLC25A36Q96CQ1 311 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 DIRAS2Q96HU8 199 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 ANGPTL4Q9BY76 406 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 HES7Q9BYE0 225 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 OR11A1Q9GZK7 315 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 SYT4Q9H2B2 425 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 RERGLQ9H628 205 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 KLHL13Q9P2N7 655 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 MRM2Q9UI43 246 aaKnown RBP7.28□□□□□ -1.24
CD44-205ENST00000352818 B9D1Q9UPM9 204 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 GRIP1Q9Y3R0 1128 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 WNK1Q9H4A3 2382 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 PCNX3Q9H6A9 2034 aa7.28□□□□□ -1.24
CD44-205ENST00000352818 NSG1A0A0A6YYJ2 146 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TRBV2A0A0J9YWF9 115 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TRBV5-5A0A0J9YX44 114 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 LOC102725191A0A1B0GVB3 256 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 SLC22A23A1A5C7 686 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 FABP12A6NFH5 140 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 NOTOA8MTQ0 251 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PRR32B1ATL7 298 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ZNF879B4DU55 563 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 H7C1C5 153 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 DVL2O14641 736 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PDCD5O14737 125 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 GMFGO60234 142 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 SERPINI2O75830 405 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 AKR7A3O95154 331 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 HPP00738 406 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 APOA1P02647 267 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 HRGP04196 525 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 KRT8P05787 483 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 CELA2AP08217 269 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 IMPDH2P12268 514 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 IL7P13232 177 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ICAM2P13598 275 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ABOP16442 354 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms