RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 FOXO3O43524 673 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CHST1O43916 411 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NBEAP1P0C6P0 100 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 IL12BP29460 328 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 EDDM3AQ14507 147 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SLC5A12Q1EHB4 618 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF14Q5SWL7 426 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NANOGP1Q8N7R0 232 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LPAR4Q99677 370 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL45Q9BRJ2 306 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR51I1Q9H343 314 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GIMAP2Q9UG22 337 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NWD1Q149M9 1564 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 KIAA2026Q5HYC2 2103 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PROB1E7EW31 1015 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SIRPB1O00241 398 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GLB1P16278 677 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 FUT2Q10981 343 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NOGQ13253 232 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NSDHLQ15738 373 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR8G2PQ6IF36 304 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PWWP2BQ6NUJ5 590 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OTOP2Q7RTS6 562 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNRF4Q8WWF5 429 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PRRX2Q99811 253 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM126AQ9H061 195 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DNMT3BQ9UBC3 853 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TIMM10BQ9Y5J6 103 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SFTA3P0C7M3 94 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SERF2P84101 59 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 BTLAQ7Z6A9 289 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RNF166Q96A37 237 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ADGRL4Q9HBW9 690 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TRAPPC1Q9Y5R8 145 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TRAV1-2A0A0B4J238 106 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF726A6NNF4 738 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 AKR1C4P17516 323 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 AVPR1AP37288 418 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DGKEP52429 567 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SLC35A1P78382 337 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LTC4SQ16873 150 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GCSAMLQ5JQS6 135 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM150AQ86TG1 271 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PRSS35Q8N3Z0 413 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR6N1Q8NGY5 312 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DNAJC19Q96DA6 116 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MMABQ96EY8 250 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 KIF12Q96FN5 646 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 JKAMPQ9P055 326 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 A8MT66 165 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ANKRD66B4E2M5 251 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GPR37O15354 613 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 HIST1H1TP22492 207 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CLDN8P56748 225 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF695Q8IW36 515 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MEGF10Q96KG7 1140 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 C12orf42Q96LP6 360 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 HAPLN2Q9GZV7 340 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LAMP3Q9UQV4 416 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3DA0A087WVF3 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3IA0A087WXS9 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3EA0A087X179 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 hCG_1809904A0A1W2PP81 198 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PPE2 198 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PR64 198 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CD8B2A6NJW9 211 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3LB9A6J9 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ISLRO14498 428 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CHEK1O14757 476 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GPR42O15529 346 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 C1QL1O75973 258 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MC5RP33032 325 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CDKN2BP42772 138 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SOX8P57073 446 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ST8SIA6P61647 398 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ATXN7L3Q14CW9 347 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MORN2Q502X0 79 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3CQ6IPX1 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DPPA4Q7L190 304 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3Q8IZP1 549 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR5AR1Q8NGP9 310 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 C2CD4CQ8TF44 421 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 KIRREL1Q96J84 757 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM8Q96KF7 97 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 UBE2J1Q9Y385 318 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR51B2Q9Y5P1 312 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PGA3P0DJD8 388 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 HIST1H1DP16402 221 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 NTSR1P30989 418 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 THBS2P35442 1172 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SP3Q02447 781 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PDLIM3Q53GG5 364 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 Q6ZTK2 550 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CDC20BQ86Y33 519 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM4Q8WVI0 70 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SLAMF6Q96DU3 332 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 C20orf144Q9BQM9 153 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MSL2Q9HCI7 577 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PGA4P0DJD7 388 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PGA5P0DJD9 388 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms