RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZFC3H1O60293 1989 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 SNRPGP15A8MWD9 76 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 MRPL33O75394 65 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 IGHA1P01876 353 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 WNT1P04628 370 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 RFX2P48378 723 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 UBE2NP61088 152 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 PCBD1P61457 104 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 FZD2Q14332 565 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 DMKNQ6E0U4 476 aaPredicted RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 UNQ6126/PRO20091Q6UXV3 157 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 NPSR1Q6W5P4 371 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 MAMSTRQ6ZN01 415 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 MOB3CQ70IA8 216 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 MCTS1Q9ULC4 181 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 hCG_1807616A0A1W2PRN6 198 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 FRG2CA6NGY1 282 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 METTL12A8MUP2 240 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 K7EPK0 472 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 SLC33A1O00400 549 aaPredicted RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 BPNT1O95861 308 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 PMP2P02689 132 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 CDKN2AP42771 156 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 PTCRAQ6ISU1 281 aaPredicted RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 ZNF529Q6P280 563 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 FAM71E2Q8N5Q1 922 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OR5M1Q8NGP8 315 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OR10R2Q8NGX6 335 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OTOSQ8NHW6 89 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 GPR119Q8TDV5 335 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 PHF7Q9BWX1 381 aaPredicted RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 CFHR5Q9BXR6 569 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 UNKLQ9H9P5 680 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 PISDQ9UG56 409 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 TMEM184BQ9Y519 407 aaPredicted RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 FOSL2P15408 326 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF44P15621 663 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SLC6A1P30531 599 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SSR4P51571 173 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PRSS53Q2L4Q9 553 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 FBXW12Q6X9E4 464 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PGAP1Q75T13 922 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 C4orf45Q96LM5 186 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 FOXQ1Q9C009 403 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ENKD1Q9H0I2 346 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 WIF1Q9Y5W5 379 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 HSPB2A8KAH6 182 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SEMG1P04279 462 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 HSPB2Q16082 182 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 AKR1C8PQ5T2L2 129 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GPR157Q5UAW9 335 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PLCXD3Q63HM9 321 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SVBPQ8N300 66 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GLYATL2Q8WU03 294 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CCDC74AQ96AQ1 378 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF845Q96IR2 970 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 GABRG3Q99928 467 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 WFDC6Q9BQY6 131 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 S1PR5Q9H228 398 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 KIF13BQ9NQT8 1826 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 BHLHE40O14503 412 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 XRCC3O43542 346 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 TK1P04183 234 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SLC25A1P53007 311 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF813Q6ZN06 617 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 TMEM91Q6ZNR0 172 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 MDGA2Q7Z553 956 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 ATOH1Q92858 354 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 CDH20Q9HBT6 801 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF286AQ9HBT8 521 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 KLHL13Q9P2N7 655 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 RTTNQ86VV8 2226 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 TMEM200CA6NKL6 621 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 STMND1H3BQB6 276 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 TMEM127O75204 238 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 VAMP5O95183 116 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SLC34A2O95436 690 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 IFNA2P01563 188 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF136P52737 540 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GUCA2AQ02747 115 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF85Q03923 595 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PXT1Q8NFP0 134 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 OR4D9Q8NGE8 314 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 IL1F10Q8WWZ1 152 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 YIPF5Q969M3 257 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PAPOLGQ9BWT3 736 aaKnown RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 POFUT1Q9H488 388 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 HAO2Q9NYQ3 351 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 KCNIP1Q9NZI2 227 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CES1P1Q9UKY3 287 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PIGBOS1A0A0B4J2F0 54 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PYCARD-AS1I3L0S3 204 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CELA2BP08218 269 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 QDPRP09417 244 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 LAP3P28838 519 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms