RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PLXNA4Q9HCM2 1894 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 A0A0U1RQV5 110 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 NPIPA7E9PJI5 369 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 LEFTY2O00292 366 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SCDO00767 359 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 FGF10O15520 208 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 IRAK2O43187 625 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF354AO60765 605 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 EPPINO95925 133 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 CTSLP07711 333 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 NPIPA8P0DM63 369 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 AOAHP28039 575 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 GRPRP30550 384 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 TSTA3Q13630 321 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 PMS2P11Q13670 270 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ARHGAP19Q14CB8 494 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 HAGHQ16775 308 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 LEG1Q6P5S2 330 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 TP53RKQ96S44 253 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ACTR3CQ9C0K3 210 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SEMA4GQ9NTN9 838 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 DKKL1Q9UK85 242 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 LOC105371242A0A075B767 164 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TRBV11-1A0A0K0K1C0 115 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 A0A1W2PQ45 241 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 A0A1W2PQY0 241 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 NKX6-3A6NJ46 265 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 CDC42EP2O14613 210 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 NPM3O75607 178 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 LEFTY1O75610 366 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TRAPPC6AO75865 159 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 MAS1P04201 325 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF286BP0CG31 522 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 CEACAM1P13688 526 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 IL9P15248 144 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 GZMHP20718 246 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 EPHA1P21709 976 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 LPOP22079 712 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 EDNRBP24530 442 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SNCAP37840 140 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 HSPB3Q12988 150 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 AMZ1Q400G9 498 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SERPINA9Q86WD7 417 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 WFDC8Q8IUA0 241 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 GABRG1Q8N1C3 465 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ARL14EPQ8N8R7 260 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TEX19Q8NA77 164 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ADAD2Q8NCV1 583 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TSLPQ969D9 159 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 KISS1RQ969F8 398 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SAT2Q96F10 170 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 FAM210BQ96KR6 192 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 OR5B2Q96R09 309 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 Q9N2J8 555 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TMED7Q9Y3B3 224 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TRAV1-2A0A0B4J238 106 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TRBV2A0A0J9YWF9 115 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 PRAMEF27A3QJZ7 478 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 RNASET2O00584 256 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ARL6IP5O75915 188 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 IL3P08700 152 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 JMJD7P0C870 316 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 PPP1CCP36873 323 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 TAS2R41P59536 307 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 S100A10P60903 97 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 BDH1Q02338 343 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 HMGN3Q15651 99 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ZBTB6Q15916 424 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 PRSS8Q16651 343 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 CLEC12BQ2HXU8 276 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 NRMQ8IXM6 262 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 COMMD1Q8N668 190 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 IGSF8Q969P0 613 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 ADAD1Q96M93 576 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 C1orf198Q9H425 327 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 GSX1Q9H4S2 264 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 HAO2Q9NYQ3 351 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 SH2B3Q9UQQ2 575 aa8.72□□□□□ -1.01
PTCHD4-201ENST00000339488 A0A0D9SEW6 157 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 ANKUB1A6NFN9 424 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 CASTOR2A6NHX0 329 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF705FA8MVS1 300 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 M0QZK8 103 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 PIAS2O75928 621 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF705DP0CH99 300 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF705BP0CI00 300 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 SERPINA2P20848 420 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 FUT3P21217 361 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 LMO1P25800 156 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 GRK4P32298 578 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 PTGER3P43115 390 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 LSSP48449 732 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 POLR2HP52434 150 aaKnown RBP8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 RIPPLY3P57055 190 aa8.71□□□□□ -1.01
PTCHD4-201ENST00000339488 RPS13P62277 151 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms