RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PRRT1Q99946 306 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SLCO1C1Q9NYB5 712 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 IGKV1D-16P01601 117 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CHRM2P08172 466 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CDK2P24941 298 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TAS2R20P59543 309 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ARG2P78540 354 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SLC7A5P1Q8MH63 180 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 GJC3Q8NFK1 279 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 OR6F1Q8NGZ6 308 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 OR51E1Q8TCB6 317 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SELENOIQ9C0D9 397 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 EMC7Q9NPA0 242 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 EXOSC3Q9NQT5 275 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SLC22A11Q9NSA0 550 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 NEUROG3Q9Y4Z2 214 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 FRMPD3Q5JV73 1810 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 A0A1B0GTH9 108 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 KNG1P01042 644 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 MSR1P21757 451 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 GALNSP34059 522 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TRA2AQ13595 282 aaKnown RBP eCLIP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF813Q6ZN06 617 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 THOC3Q96J01 351 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 RAB33BQ9H082 229 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 LOC285556D6RIA3 1793 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 A0A0G2JMZ2 1700 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 EP300Q09472 2414 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF93P35789 620 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ATP1B3P54709 279 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 PGAP1Q75T13 922 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 STEAP2Q8NFT2 490 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 C12orf10Q9HB07 376 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 OR2S2Q9NQN1 319 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 DSPPQ9NZW4 1301 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ARPC5O15511 151 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 IGHA1P01876 353 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CD79AP11912 226 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 GALP22466 123 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CEBPEQ15744 281 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 COL13A1Q5TAT6 717 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 NKAIN3Q8N8D7 197 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZSCAN4Q8NAM6 433 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 OIT3Q8WWZ8 545 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SPACA9Q96E40 222 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 A0A0B4J203 849 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TRAV1-2A0A0B4J238 106 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 LOC107986453A0A1B0GWG9 222 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SHISA8B8ZZ34 492 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 PVALBP20472 110 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 DCLRE1CQ96SD1 692 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CDX2Q99626 313 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CDC6Q99741 560 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SEC22CQ9BRL7 303 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 UCK1Q9HA47 277 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 A0A1W2PQD3 144 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CD46P15529 392 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ATG4DQ86TL0 474 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OTOSQ8NHW6 89 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CTHRC1Q96CG8 243 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CYSLTR2Q9NS75 346 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TNFRSF10AO00220 468 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 APLNRP35414 380 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 IDO2Q6ZQW0 420 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 MOB3CQ70IA8 216 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ADGRE4PQ86SQ3 457 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TRAPPC6BQ86SZ2 158 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF615Q8N8J6 731 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 IL17RDQ8NFM7 739 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OR5D18Q8NGL1 313 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OXGR1Q96P68 337 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 MENTQ9BUN1 341 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PLEKHJ1Q9NW61 149 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CTSBP07858 339 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 C2orf76Q3KRA6 126 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SLC36A2Q495M3 483 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 DVL3Q92997 716 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 RAB3CQ96E17 227 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OCIAD1Q9NX40 245 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM82A0PJX8 343 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 PATE3B3GLJ2 98 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 DHHO43323 396 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ZFPL1O95159 310 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SPNP16150 400 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CD79BP40259 229 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 DYRK1AQ13627 763 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 NPEPL1Q8NDH3 523 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CMSS1Q9BQ75 279 aaKnown RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OPA3Q9H6K4 179 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF223Q9UK11 482 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OR5H6Q8NGV6 325 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 METTL9Q9H1A3 318 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SLCO5A1Q9H2Y9 848 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 A6NLC8 198 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CBR3O75828 277 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 SEC61A1P61619 476 aaKnown RBP5.68□□□□□ -1.5
PRKDC-202ENST00000338368 CFAP77Q6ZQR2 320 aa5.68□□□□□ -1.5
PRKDC-202ENST00000338368 OR8B4Q96RC9 309 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms