RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 AMDHD2Q9Y303 409 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 FCF1Q9Y324 198 aaKnown RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 HS3ST3B1Q9Y662 390 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 KCNE3Q9Y6H6 103 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 COL4A3Q01955 1670 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 SMCO3A2RU48 225 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 TMEM235A6NFC5 223 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 TMEM202A6NGA9 273 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 NPIPB15A6NHN6 443 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 PLPP1O14494 284 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 DOK2O60496 412 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 LILRB3O75022 631 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 CRTAPO75718 401 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 MMP3P08254 477 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 QDPRP09417 244 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 METTL15P1P0C7V9 234 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 F3P13726 295 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 LMO1P25800 156 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 CX3CR1P49238 355 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 GABREP78334 506 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 NKX6-1P78426 367 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 ZNF674Q2M3X9 581 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 C14orf28Q4W4Y0 310 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 RNF219Q5W0B1 726 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 RPL7L1Q6DKI1 246 aaKnown RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 FAHD2BQ6P2I3 314 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 TMPRSS12Q86WS5 348 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 BHLHE23Q8NDY6 225 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 ABHD5Q8WTS1 349 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 FAHD2AQ96GK7 314 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 ZNF764Q96H86 408 aaPredicted RBP6.12□□□□□ -1.43
CAST-203ENST00000338252 ZNF558Q96NG5 402 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 SLC6A7Q99884 636 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 SRMSQ9H3Y6 488 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 SLC2A8Q9NY64 477 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 ATG4BQ9Y4P1 393 aa6.12□□□□□ -1.43
CAST-203ENST00000338252 DENND4CQ5VZ89 1909 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 LOC100509620A0A075B734 347 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 RIIAD1A6NNX1 92 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 GRXCR1A8MXD5 290 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 M0R143 59 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 EIF1AYO14602 144 aaKnown RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 SMIM10L2AP0DMW4 78 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SMIM10L2BP0DMW5 78 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SERPINF1P36955 418 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 EIF1AXP47813 144 aaKnown RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 TBPL1P62380 186 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 IL13RA1P78552 427 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 RAB35Q15286 201 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ELOCQ15369 112 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 Q499Y3 187 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 TMEM35AQ53FP2 167 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 C9orf64Q5T6V5 341 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 GGNBP1Q5YKI7 109 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ZNF529Q6P280 563 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 WDR88Q6ZMY6 472 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 RFLNAQ6ZTI6 216 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 RTL10Q7L3V2 364 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 TAF8Q7Z7C8 310 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ZNF227Q86WZ6 799 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SLC35F2Q8IXU6 374 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ZNF740Q8NDX6 193 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 OR13C2Q8NGS9 318 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 PFN4Q8NHR9 129 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 CXorf40AQ8TE69 158 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ZMYND19Q96E35 227 aaPredicted RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 PTCHD1Q96NR3 888 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 LYSMD1Q96S90 227 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 MCHR1Q99705 422 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 FAM212BQ9NTI7 297 aaPredicted RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 CLDND1Q9NY35 253 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 MSRAQ9UJ68 235 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 WDFY4Q6ZS81 3184 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 TRAV8-7A0A075B6U6 113 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 TRBV5-5A0A0J9YX44 114 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SYT7O43581 403 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SRPX2O60687 465 aaPredicted RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 ZIC2O95409 532 aaPredicted RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 DUS4LO95620 317 aaKnown RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 TRGC2P03986 189 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 TRGC1P0CF51 173 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 RAB6AP20340 208 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 THBS4P35443 961 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 NPY4RP50391 375 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ERVFRD-1P60508 538 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 RBX1P62877 108 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 GLO1Q04760 184 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 SMAD4Q13485 552 aaKnown RBP6.11□□□□□ -1.43
CAST-203ENST00000338252 MOGAT2Q3SYC2 334 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 AKR1C8PQ5T2L2 129 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 OR2T2Q6IF00 324 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 ZNF343Q6P1L6 599 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 CHST9Q7L1S5 443 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 THNSL2Q86YJ6 484 aa6.11□□□□□ -1.43
CAST-203ENST00000338252 OR51D1Q8NGF3 324 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms