RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TIMM8AO60220 97 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 LRP3O75074 770 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 NXPH2O95156 264 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 GSTP1P09211 210 aaKnown RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CCKARP32238 428 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CLDN10P78369 228 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 PMS2P11Q13670 270 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM176BQ3YBM2 270 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF813Q6ZN06 617 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 ADGRG3Q86Y34 549 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 RBM45Q8IUH3 476 aaKnown RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 OR6S1Q8NH40 331 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 FAM3CQ92520 227 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 APH1AQ96BI3 265 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CDCA4Q9BXL8 241 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 A0A087X0M5 115 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 A0A1B0GX30 115 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SDCBPO00560 298 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 EFSO43281 561 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CTNSO60931 367 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CD3DP04234 171 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 DEFA4P12838 97 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 PVRP15151 417 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 MRC1P22897 1456 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TEAD1P28347 426 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CHRNB4P30926 498 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 PRR27Q6MZM9 219 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 DHRS11Q6UWP2 260 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 FAM71CQ8NEG0 241 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 LKAAEAR1Q8TD35 194 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 DYRK2Q92630 601 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 OR8B4Q96RC9 309 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SYT11Q9BT88 431 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SHARPINQ9H0F6 387 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 GABARAPL1Q9H0R8 117 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 GNB4Q9HAV0 340 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 GPR160Q9UJ42 338 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 HS3ST1O14792 307 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 MRPL33O75394 65 aaKnown RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 F2RP25116 425 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 C9orf152Q5JTZ5 239 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 MFSD9Q8NBP5 474 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 OR1J1Q8NGS3 322 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SLC39A7Q92504 469 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 OPALINQ96PE5 141 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TEAD3Q99594 435 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 MMP26Q9NRE1 261 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SIRT3Q9NTG7 399 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 RCL1Q9Y2P8 373 aaKnown RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TMED7-TICAM2A0A0A6YYA0 188 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SLC2A10O95528 541 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SCD5Q86SK9 330 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 BCL7CQ8WUZ0 217 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 NEURL3Q96EH8 262 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 BET1LQ9NYM9 111 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 HSFX1Q9UBD0 423 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TMED7Q9Y3B3 224 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 HSBP1O75506 76 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF25P17030 456 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-201ENST00000334504 FOLR3P41439 243 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 RAB38P57729 211 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 BAMBIQ13145 260 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 SYT13Q7L8C5 426 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CNEP1R1Q8N9A8 125 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CLSTN3Q9BQT9 956 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM38AQ9H6F2 299 aa8.99□□□□□ -0.97
COL4A6-201ENST00000334504 CACNA1FO60840 1977 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SLC25A4P12235 298 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 GALR1P47211 349 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SLC16A12Q6ZSM3 486 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 FAM24BQ8N5W8 94 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DUSP22Q9NRW4 184 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 RNF150Q9ULK6 438 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 NEURL4Q96JN8 1562 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 ATXN1LP0C7T5 689 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DCTDP32321 178 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PRLHRP49683 370 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MAT1AQ00266 395 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TTC9BQ8N6N2 239 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 NUDT8Q8WV74 236 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SLC35E1Q96K37 410 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 NOL4LQ96MY1 436 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MS4A10Q96PG2 267 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 GABARAPL3Q9BY60 117 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 FBXO34Q9NWN3 711 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MMP24Q9Y5R2 645 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PRAMEF25A6NGN4 478 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 H0YIV9 168 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 HRH1P35367 487 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 CSN1S1P47710 185 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 RAC1P63000 192 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PMP22Q01453 160 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF750Q32MQ0 723 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PRAMEF5Q5TYX0 476 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PRAMEF6Q5VXH4 476 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms