RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 STEAP1BQ6NZ63 245 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 CISD2Q8N5K1 135 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 VN1R2Q8NFZ6 395 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 OR10V1Q8NGI7 309 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 IER2Q9BTL4 223 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NRIP3Q9NQ35 241 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 HRO43593 1189 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 PTTG1O95997 202 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 GPM6AP51674 278 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 RACK1P63244 317 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 HSF1Q00613 529 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 FAM109AQ8N4B1 249 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 OR4F5Q8NH21 305 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 OR4F4Q96R69 305 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 MBOAT4Q96T53 435 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NIPSNAP1Q9BPW8 284 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 RTL8AQ9BWD3 113 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NAA50Q9GZZ1 169 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 IKZF5Q9H5V7 419 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 CHRNA9Q9UGM1 479 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 RGS11O94810 467 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 FOXK2Q01167 660 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 CST9Q5W186 159 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NPEPL1Q8NDH3 523 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 C20orf85Q9H1P6 137 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 LOXL2Q9Y4K0 774 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 UGT2A1Q9Y4X1 527 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 CKAP5Q14008 2032 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 ZNF83P51522 516 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 SUB1P53999 127 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLN8-201ENST00000331222 C1orf140Q5VVS0 124 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 FAAP20Q6NZ36 180 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 KIAA1958Q8N8K9 716 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NXF2Q9GZY0 626 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 TMEM231Q9H6L2 316 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 SLC35D1Q9NTN3 355 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 NAP1L6A6NFF2 107 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 TAPBPO15533 448 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 IL10RAQ13651 578 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 TMEM123Q8N131 208 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 SLC16A11Q8NCK7 471 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 MOB3AQ96BX8 217 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 M0R082 166 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 GLB1P16278 677 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 TBXA2RP21731 343 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 PMP22Q01453 160 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 GAMTQ14353 236 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 DUSP5Q16690 384 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 RPS19BP1Q86WX3 136 aaKnown RBP9.67□□□□□ -0.86
CLN8-201ENST00000331222 LRFN3Q9BTN0 628 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
CLN8-201ENST00000331222 ZNFX1Q9P2E3 1918 aaKnown RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 C20orf202A1L168 122 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 MAP2K6P52564 334 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 ZNF91Q05481 1191 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 SFXN4Q6P4A7 337 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 C17orf107Q6ZR85 190 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 APH1BQ8WW43 257 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 CLEC1BQ9P126 229 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 EXO1Q9UQ84 846 aaKnown RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 R4GN57 208 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 RPL22L1Q6P5R6 122 aaKnown RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 SIAH3Q8IW03 269 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 CNTN4Q8IWV2 1026 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 DEFB124Q8NES8 71 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 NRG4Q8WWG1 115 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 TSLPQ969D9 159 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 FAM3DQ96BQ1 224 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 CPPED1Q9BRF8 314 aaPredicted RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 UBE2ZQ9H832 354 aaPredicted RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 ZNF391Q9UJN7 358 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 ING1Q9UK53 422 aaPredicted RBP9.66□□□□□ -0.86
CLN8-201ENST00000331222 DEFB108AA8MXU0 73 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 SLC16A6O15403 523 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 FGF4P08620 206 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 GABRB3P28472 473 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 TRIM23P36406 574 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 TSPAN31Q12999 210 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 FRMPD2BQ6IN97 320 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 DTWD2Q8NBA8 298 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 C2CD4CQ8TF44 421 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 MUTYHQ9UIF7 546 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 ITGB4P16144 1822 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 SVILO95425 2214 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 LOC100289279A0A1B0GTE1 492 aa9.66□□□□□ -0.86
CLN8-201ENST00000331222 CLDN24A6NM45 220 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms