RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRIM36Q9NQ86 728 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 INTS1Q8N201 2190 aaKnown RBP14.21□□□□□ -0.13
PDGFB-201ENST00000331163 A0A0A6YYJ9 748 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 IQCMA0A1B0GVH7 501 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 MAS1P04201 325 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 QDPRP09417 244 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 RPL27P61353 136 aaKnown RBP14.21□□□□□ -0.13
PDGFB-201ENST00000331163 GLO1Q04760 184 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 PLPPR5Q32ZL2 321 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
PDGFB-201ENST00000331163 ZNRF4Q8WWF5 429 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 INTS14Q96SY0 518 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 NIPAL2Q9H841 368 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 ENAMQ9NRM1 1142 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 VSX1Q9NZR4 365 aaPredicted RBP14.21□□□□□ -0.13
PDGFB-201ENST00000331163 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 A0A0J9YW62 118 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 SBK2P0C263 348 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 HLA-DMAP28067 261 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 TALDO1P37837 337 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 RBM34P42696 430 aaKnown RBP14.21□□□□□ -0.14
PDGFB-201ENST00000331163 BATF2Q8N1L9 274 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 OR10D3Q8NH80 312 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 KLHL15Q96M94 604 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 LRFN5Q96NI6 719 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 NDUFB11Q9NX14 153 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 ASH2LQ9UBL3 628 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 GTF3C1Q12789 2109 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 ESPL1Q14674 2120 aa14.21□□□□□ -0.14
PDGFB-201ENST00000331163 COL12A1Q99715 3063 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 E9PI62 339 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 H2BFMP0C1H6 154 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 SDHAP31040 664 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 RASGEF1BQ0VAM2 473 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ZBTB37Q5TC79 503 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 FAM26EQ8N5C1 309 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ARIH2OSQ8N7S6 290 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ST8SIA1Q92185 356 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 FAM71F1Q96KD3 344 aaPredicted RBP14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ZNF385AQ96PM9 386 aaKnown RBP14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ELOVL3Q9HB03 270 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 PLEK2Q9NYT0 353 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 OR5H15A6NDH6 313 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 TTLL8A6PVC2 850 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 LANCL1O43813 399 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 DHFRP00374 187 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 IL1AP01583 271 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 FAM87AP0C7U9 286 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 SAMD12Q8N8I0 201 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 UXS1Q8NBZ7 420 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 MRGPRX4Q96LA9 322 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 CD3GP09693 182 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 CXCL3P19876 107 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 MLLT11Q13015 90 aaPredicted RBP14.2□□□□□ -0.14
PDGFB-201ENST00000331163 GALEQ14376 348 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 C12orf73Q69YU5 71 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 SSX6Q7RTT6 188 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 ZADH2Q8N4Q0 377 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 TEX19Q8NA77 164 aa14.2□□□□□ -0.14
PDGFB-201ENST00000331163 USF3Q68DE3 2245 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 BHLHE40O14503 412 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 MRPL33O75394 65 aaKnown RBP14.19□□□□□ -0.14
PDGFB-201ENST00000331163 DSCR4P56555 118 aaPredicted RBP14.19□□□□□ -0.14
PDGFB-201ENST00000331163 CLDN12P56749 244 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 TMPPEQ6ZT21 453 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 DCXRQ7Z4W1 244 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 C9orf62Q8N4C0 152 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 TMEM178AQ8NBL3 297 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 SLC5A6Q9Y289 635 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 B4GALT1P15291 398 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 EIF1P41567 113 aaKnown RBP14.19□□□□□ -0.14
PDGFB-201ENST00000331163 PPP3R1P63098 170 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 RAB40BQ12829 278 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 GPR176Q14439 515 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 MESTQ5EB52 335 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 DBX2Q6ZNG2 339 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 OR2M7Q8NG81 312 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 HSD17B8Q92506 261 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 TRIB1Q96RU8 372 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 NAA11Q9BSU3 229 aaPredicted RBP14.19□□□□□ -0.14
PDGFB-201ENST00000331163 FKRPQ9H9S5 495 aa14.19□□□□□ -0.14
PDGFB-201ENST00000331163 ZNF814B7Z6K7 855 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 EFNA2O43921 213 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 IGHG1P01857 330 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 STOMP27105 288 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 MSX1P28360 303 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 HTR1FP30939 366 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 AP2S1P53680 142 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 CSNK2A1P68400 391 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 MEIOBQ8N635 442 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 INTS12Q96CB8 462 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 B3GNT2Q9NY97 397 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 NOSIPQ9Y314 301 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 AK6Q9Y3D8 172 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 CACNA1DQ01668 2161 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 SELENOPP49908 381 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 CISD2Q8N5K1 135 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 TMEM251Q8N6I4 163 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 OR11H4Q8NGC9 324 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms