RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 FNDC8Q8TC99 324 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 THEM6Q8WUY1 208 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 RNF166Q96A37 237 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 CEP19Q96LK0 163 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 RBP7Q96R05 134 aa16.58■□□□□ 0.24
EXOSC3-201ENST00000327304 SHISA3A0PJX4 238 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 ATXN7O15265 892 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 OR8G3PP0DMU2 310 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 FCGR2AP12318 317 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF12P17014 697 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 MYL9P24844 172 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 PSMB10P40306 273 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 RNPS1Q15287 305 aaKnown RBP16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 TEX30Q5JUR7 227 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 SPANXN2Q5MJ10 180 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 THEM4Q5T1C6 240 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 RTL6Q6ICC9 239 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC18B1Q6NT16 456 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 MCEMP1Q8IX19 187 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 TUSC5Q8IXB3 177 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 YIPF7Q8N8F6 280 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC25A44Q96H78 314 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 OR2M2Q96R28 347 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 TTYH2Q9BSA4 534 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 OCEL1Q9H607 264 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 RNF122Q9H9V4 155 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 KCNG2Q9UJ96 466 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 CMAHPQ9Y471 501 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 ZGRF1Q86YA3 2104 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 SHANK1Q9Y566 2161 aa16.57■□□□□ 0.24
EXOSC3-201ENST00000327304 WDR1O75083 606 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF432O94892 652 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 IGHG1P01857 330 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 HRGP04196 525 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 CALRP27797 417 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 TNFSF8P32971 234 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 SELENOPP49908 381 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ADAM8P78325 824 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 PCK2Q16822 640 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 NSUN5P2Q63ZY6 315 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 C3P1Q6ZMU1 363 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 PARP16Q8N5Y8 322 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 C9orf106Q8NAJ2 232 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC26A10Q8NG04 563 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 OR8B4Q96RC9 309 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 CALHM2Q9HA72 323 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 BCO1Q9HAY6 547 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 EMC3Q9P0I2 261 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 IKZF2Q9UKS7 526 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF835Q9Y2P0 537 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF281Q9Y2X9 895 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 FAM215AQ9Y5M1 114 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 FIGNL2A6NMB9 653 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF726A6NNF4 738 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 PSMD9O00233 223 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 DVL2O14641 736 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC19A2O60779 497 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ARL6IP5O75915 188 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 PGA4P0DJD7 388 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 PGA3P0DJD8 388 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 GABRA1P14867 456 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 RPS11P62280 158 aaKnown RBP eCLIP16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ROM1Q03395 351 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ALKBH1Q13686 389 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 YIF1BQ5BJH7 314 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 ZMAT1Q5H9K5 638 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 C1orf185Q5T7R7 199 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 KCTD18Q6PI47 426 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 UNQ9370/PRO34162Q6UXP9 181 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 TMEM123Q8N131 208 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 RPRMLQ8N4K4 120 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 NOXO1Q8NFA2 376 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 WNT2BQ93097 391 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC30A2Q9BRI3 323 aa16.56■□□□□ 0.24
EXOSC3-201ENST00000327304 MED12LQ86YW9 2145 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 TRAV1-2A0A0B4J238 106 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF724A8MTY0 619 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 LOC110117498-PIK3R3F6TDL0 507 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 GPR171O14626 319 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 RGS5O15539 181 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 SPARCP09486 303 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 PSKH1P11801 424 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF823P16415 610 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 RPS27P42677 84 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 NANOS3P60323 173 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 FMODQ06828 376 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 FDX2Q6P4F2 183 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 SEM1Q6ZVN7 128 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 AAED1Q7RTV5 226 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 DOLPP1Q86YN1 238 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF679Q8IYX0 411 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 TMEM45BQ96B21 275 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 PPIL3Q9H2H8 161 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 RCE1Q9Y256 329 aa16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 NOSIPQ9Y314 301 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-201ENST00000327304 A0A1B0GVG6 124 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 PRRG2O14669 202 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 YES1P07947 543 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 UCHL1P09936 223 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms