RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 KCTD20Q7Z5Y7 419 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 GABRG1Q8N1C3 465 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 LRRC18Q8N456 261 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OR13F1Q8NGS4 319 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 RNF133Q8WVZ7 376 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 GATAD2BQ8WXI9 593 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 MAP6Q96JE9 813 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 MGLLQ99685 303 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 SH3GL3Q99963 347 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 SLCO1C1Q9NYB5 712 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 MRM2Q9UI43 246 aaKnown RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 GNG8Q9UK08 70 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 IKZF2Q9UKS7 526 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OSGIN2Q9Y236 505 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 J3QLW9 94 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 WNT11O96014 354 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF19P17023 458 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 IGHV1-2P23083 117 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 OR12D2P58182 307 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 PCBD1P61457 104 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 CFAP77Q6ZQR2 320 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 BEND4Q6ZU67 534 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 GPR141Q7Z602 305 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 KRT77Q7Z794 578 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SYT9Q86SS6 491 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SATL1Q86VE3 508 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF679Q8IYX0 411 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF610Q8N9Z0 462 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TMIGD2Q96BF3 282 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SLAMF6Q96DU3 332 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 FBXO17Q96EF6 278 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 OPALINQ96PE5 141 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TRIM36Q9NQ86 728 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ACOXLQ9NUZ1 547 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 BABAM2Q9NXR7 383 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF629Q9UEG4 869 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 NCOA6Q14686 2063 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 CFAP46Q8IYW2 2715 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 MAGEB4O15481 346 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 KALRNO60229 2985 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 LALBAP00709 142 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TACSTD2P09758 323 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 HSMCR30P0CW71 290 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TTKP33981 857 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 OPRL1P41146 370 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TAS2R43P59537 309 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SCRN3Q0VDG4 424 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 MRPL28Q13084 256 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 MRPL49Q13405 166 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ARMCX4Q5H9R4 360 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 DEGS2Q6QHC5 323 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 NCCRP1Q6ZVX7 275 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SLC16A14Q7RTX9 510 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 KLBQ86Z14 1044 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 SKA3Q8IX90 412 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF433Q8N7K0 673 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 C1orf162Q8NEQ5 155 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 GJC3Q8NFK1 279 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 OR10S1Q8NGN2 331 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 RND1Q92730 232 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 PELI1Q96FA3 418 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 KCNN2Q9H2S1 579 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 PNRC2Q9NPJ4 139 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 BATF3Q9NR55 127 aa8.98□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF878C9JN71 531 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 PSMD9O00233 223 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 MSTNO14793 375 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 RER1O15258 196 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF254O75437 659 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 P2RY6Q15077 328 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 LRRN1Q6UXK5 716 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 RHOUQ7L0Q8 258 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 DPPA2Q7Z7J5 298 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 GALNT11Q8NCW6 608 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 BOD1Q96IK1 185 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 MROQ9BYG7 248 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 ELOVL3Q9HB03 270 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 DDX28Q9NUL7 540 aaKnown RBP8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 A0A096LPE4 126 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 MMP7P09237 267 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 RIDAP52758 137 aaKnown RBP8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 GBX2P52951 348 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 RAB35Q15286 201 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 TSTQ16762 297 aaKnown RBP8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 SLC36A2Q495M3 483 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 SPATC1Q76KD6 591 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 UFD1Q92890 307 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF224Q9NZL3 707 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 LRP12Q9Y561 859 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 TIMM10BQ9Y5J6 103 aa8.97□□□□□ -0.97
VIPAS39-201ENST00000327028 CACNA1CQ13936 2221 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 DPPA5A6NC42 116 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 E9PI62 339 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms