RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 C9J4A7 227 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 AKR7A3O95154 331 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 ERCC1P07992 297 aaPredicted RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 NMBP08949 121 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 SULT1A3P0DMM9 295 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 SULT1A4P0DMN0 295 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 YPEL5P62699 121 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 TMEM176BQ3YBM2 270 aaPredicted RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 ZNF595Q8IYB9 648 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 RFLNBQ8N5W9 214 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 STK35Q8TDR2 534 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 ZNF587Q96SQ5 575 aaPredicted RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 WDR76Q9H967 626 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 EFCAB7A8K855 629 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 H7C1Q1 480 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 SRPX2O60687 465 aaPredicted RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 MEOX2P50222 304 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 Q499Y3 187 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 C9orf152Q5JTZ5 239 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 AKR1C8PQ5T2L2 129 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 GLDNQ6ZMI3 551 aaPredicted RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 ELSPBP1Q96BH3 223 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 ZC3HAV1LQ96H79 300 aaKnown RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 OR6C1Q96RD1 312 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 INPP5EQ9NRR6 644 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 HIF3AQ9Y2N7 669 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 SPIN3Q5JUX0 258 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 TMEM201Q5SNT2 666 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 MANEAQ5SRI9 462 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 DGAT2L6Q6ZPD8 337 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 PXKQ7Z7A4 578 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 SLC35F3Q8IY50 421 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 ADAMTS18Q8TE60 1221 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 PTP4A1Q93096 173 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 KTI12Q96EK9 354 aaPredicted RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 ARL5BQ96KC2 179 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 SSX3Q99909 188 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 KLF15Q9UIH9 416 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 KCNAB3O43448 404 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 CRTAPO75718 401 aaPredicted RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 TBXA2RP21731 343 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 S100PP25815 95 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 PRSS12P56730 875 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 FUT5Q11128 374 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 CDK5R1Q15078 307 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 BATFQ16520 125 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 KCNRGQ8N5I3 272 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 LCORQ96JN0 433 aaPredicted RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 DKKL1Q9UK85 242 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 B3GALT1Q9Y5Z6 326 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 OR6C68A6NDL8 312 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 GPRIN2O60269 458 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 BRINP1O60477 761 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 RAB13P51153 203 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
VARS2-201ENST00000321897 WDR88Q6ZMY6 472 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 LANCL3Q6ZV70 420 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 RNF141Q8WVD5 230 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 PELI1Q96FA3 418 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 ISYNA1Q9NPH2 558 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 SUSD2Q9UGT4 822 aa13.85□□□□□ -0.19
VARS2-201ENST00000321897 TP53BP1Q12888 1972 aaPredicted RBP13.84□□□□□ -0.19
VARS2-201ENST00000321897 TMED7-TICAM2A0A0A6YYA0 188 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 IGHV5-51A0A0C4DH38 117 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 GABRA1P14867 456 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 CNR1P21554 472 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 FXYD4P59646 89 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 AADACL4Q5VUY2 407 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 FCRL6Q6DN72 434 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ATRAIDQ6UW56 229 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ZNF704Q6ZNC4 412 aaPredicted RBP13.84□□□□□ -0.19
VARS2-201ENST00000321897 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 FAM3DQ96BQ1 224 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 RSRP1Q9BUV0 290 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 SELENOIQ9C0D9 397 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 FSCN3Q9NQT6 498 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 TMED7Q9Y3B3 224 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 VWA8A3KMH1 1905 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ARRDC5A6NEK1 342 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 NPIPA2E9PIF3 369 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 NPIPA3F8WFD2 350 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 LY86O95711 162 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 IGHV3-9P01782 118 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 CLDN6P56747 220 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 RASGEF1BQ0VAM2 473 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 PAPD4Q6PIY7 484 aaKnown RBP13.84□□□□□ -0.19
VARS2-201ENST00000321897 OR2W3Q7Z3T1 314 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 MCEMP1Q8IX19 187 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ZNF321PQ8N8H1 164 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 KLHL13Q9P2N7 655 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 CSAG2Q9Y5P2 127 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms