RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 NMNAT3Q96T66 252 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF281Q9Y2X9 895 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PI4KAP42356 2102 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 XRCC2O43543 280 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 MTNR1BP49286 362 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 CD226Q15762 336 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 RNASE12Q5GAN4 147 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 ASCC1Q8N9N2 400 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 RRNAD1Q96FB5 475 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 CCDC32Q9BV29 185 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 MYOZ1Q9NP98 299 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF222Q9UK12 451 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 IGLV3-32A0A0A0MS00 114 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 FABP12A6NFH5 140 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 SPINT2O43291 252 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PIGFQ07326 219 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 HACD4Q5VWC8 232 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 ADAMTS14Q8WXS8 1223 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC25A44Q96H78 314 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PRSS27Q9BQR3 290 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 CRLF2Q9HC73 371 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 OR14J1Q9UGF5 321 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM240BA0A1B0GVZ2 78 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PTP4A3O75365 173 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 PMS2P2O95744 297 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 COX6A1P12074 109 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 HFEQ30201 348 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 APCDD1LQ8NCL9 501 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 NPEPL1Q8NDH3 523 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 NTNG1Q9Y2I2 539 aa7.7□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM269A0A1B0GVZ9 245 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 HRKO00198 91 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 IGKV1D-16P01601 117 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 RAC3P60763 192 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB31Q13636 194 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ARHGEF39Q8N4T4 335 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 OR2M3Q8NG83 312 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF426Q9BUY5 554 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 SYT4Q9H2B2 425 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 KIAA1456Q9P272 454 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 COPZ2Q9P299 210 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 MRPS18CQ9Y3D5 142 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 TEX51A0A1B0GUA7 166 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM183AA6NL82 134 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 SOCS6O14544 535 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CREBL2O60519 120 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 SNAPC5O75971 98 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 PET100P0DJ07 73 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 HIST1H1CP16403 213 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 SCGB2B2Q4G0G5 96 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ZAR1Q86SH2 424 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 BMPERQ8N8U9 685 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF775Q96BV0 537 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 DTX4Q9Y2E6 619 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 C5orf51A6NDU8 294 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CRTAPO75718 401 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 PPP3CBP16298 524 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB3BP20337 219 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 TGM4P49221 684 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 IDH3GP51553 393 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ACSM1Q08AH1 577 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4F15Q8NGB8 312 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 HAS2Q92819 552 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 FBXO17Q96EF6 278 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 PHB2Q99623 299 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 KCNJ15Q99712 375 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 JAM3Q9BX67 310 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ZFP57Q9NU63 452 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 RCE1Q9Y256 329 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 MCRIP1C9JLW8 97 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 UBCP0CG48 685 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CPEP16870 476 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CRYBA2P53672 197 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 C9orf152Q5JTZ5 239 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CBLN3Q6UW01 205 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 BHLHA15Q7RTS1 189 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 IGFN1Q86VF2 1251 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4Q3Q8NH05 313 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 HGDQ93099 445 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 PLEKHJ1Q9NW61 149 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 NDUFB11Q9NX14 153 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 B3GNT3Q9Y2A9 372 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 SCN3AQ9NY46 2000 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 COL4A3Q01955 1670 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 OR6C6A6NF89 314 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 BHLHE40O14503 412 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 BMI1P35226 326 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CATR1Q13166 79 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 HES1Q14469 280 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 AGAP6Q5VW22 663 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 CDCP2Q5VXM1 449 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 FCAMRQ8WWV6 532 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 MIB2Q96AX9 1013 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 ELMOD3Q96FG2 381 aa7.69□□□□□ -1.18
PDLIM5-201ENST00000317968 M0QZ24 198 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 AKR7A3O95154 331 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 LAP3P28838 519 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 RPS18P62269 152 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms