RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ADAM18Q9Y3Q7 739 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PCSK5Q92824 1860 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 LOC102723996A0A087X1L8 192 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 NDUFB2O95178 105 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 IL5P05113 134 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 SFTPCP11686 197 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PAICSP22234 425 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PTGFRP43088 359 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 SLC6A8P48029 635 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 SGCAQ16586 387 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 IDNKQ5T6J7 187 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 EEF1A1P5Q5VTE0 462 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 C1QL3Q5VWW1 255 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 SLC6A19Q695T7 634 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 MEPCEQ7L2J0 689 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
CPNE1-201ENST00000317677 OR5W2Q8NH69 310 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 ZNF563Q8TA94 476 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 GPR119Q8TDV5 335 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 DUSP19Q8WTR2 217 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 LIPHQ8WWY8 451 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 RFKQ969G6 155 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 PNPLA2Q96AD5 504 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM41AQ96HV5 264 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 TIMP4Q99727 224 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 MMP25Q9NPA2 562 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 UFSP2Q9NUQ7 469 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 DMRT1Q9Y5R6 373 aa11.74□□□□□ -0.53
CPNE1-201ENST00000317677 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 DKK1O94907 266 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 IGF2P01344 180 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 HIST1H1CP16403 213 aaKnown RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 P2RY4P51582 365 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM44Q2T9K0 475 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 PIP4P1Q86T03 277 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 LHFPL3Q86UP9 236 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 TPRA1Q86W33 373 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM99Q8N816 258 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 OR11G2Q8NGC1 345 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 OR10K1Q8NGX5 313 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 ZPLD1Q8TCW7 415 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 TSNAXQ99598 290 aaKnown RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 ARL6Q9H0F7 186 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
CPNE1-201ENST00000317677 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 IER3IP1Q9Y5U9 82 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 CHD8Q9HCK8 2581 aa11.73□□□□□ -0.53
CPNE1-201ENST00000317677 A0A1B0GWJ7 208 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 B4E171 279 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CLN5O75503 358 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SIX6O95475 246 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 GYPBP06028 91 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CYC1P08574 325 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CNR1P21554 472 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PAX6P26367 422 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 ITPKBP27987 946 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PTGDSP41222 190 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 TSPAN7P41732 249 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 P2RX1P51575 399 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 NRG3P56975 720 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 OR5M10Q6IEU7 315 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 GID4Q8IVV7 300 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SERPINA12Q8IW75 414 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SAMD12Q8N8I0 201 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SDR9C7Q8NEX9 313 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 OR51G2Q8NGK0 314 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 OR4K13Q8NH42 304 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 TAAR8Q969N4 342 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 DNAJA3Q96EY1 480 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 JAM3Q9BX67 310 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 EML6Q6ZMW3 1958 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 IGHV1-45A0A0A0MS14 117 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PRR23D1E9PI22 279 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PHYHO14832 338 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 PRR23D2P0DMB1 279 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 COX6A1P12074 109 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 MPGP29372 298 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 EIF2S3P41091 472 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms