RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RABIFP47224 123 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 FLI1Q01543 452 aaPredicted RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 SIGLEC14Q08ET2 396 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 BIKQ13323 160 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PAN3Q58A45 887 aaKnown RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 ELP2Q6IA86 826 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PAPD4Q6PIY7 484 aaKnown RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 LYG2Q86SG7 212 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PTPMT1Q8WUK0 201 aaPredicted RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 AQP3Q92482 292 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 SLC46A1Q96NT5 459 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 FOXN4Q96NZ1 517 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PRRT1Q99946 306 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 ABHD6Q9BV23 337 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PURGQ9UJV8 347 aaKnown RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 FRG2CA6NGY1 282 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 SLC16A7O60669 478 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PLATP00750 562 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 CA3P07451 260 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 H2AFB1P0C5Y9 115 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 RAB6AP20340 208 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 DLSTP36957 453 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 SNTB1Q13884 538 aaKnown RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 ELOCQ15369 112 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 TAF13Q15543 124 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 CHRDL2Q6WN34 429 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 CCDC36Q8IYA8 594 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 OR51A2Q8NGJ7 313 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PPP1R1CQ8WVI7 109 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 PDCD10Q9BUL8 212 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 NUDT9Q9BW91 350 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 TXNIPQ9H3M7 391 aa17.15■□□□□ 0.34
RTN4-201ENST00000317610 TMEM184BQ9Y519 407 aaPredicted RBP17.15■□□□□ 0.34
RTN4-201ENST00000317610 C10orf142B7Z368 130 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 SULT2B1O00204 365 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 IGHMP01871 453 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 CTLA4P16410 223 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ADAM8P78325 824 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 EIF2B1Q14232 305 aaKnown RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 SCGB2B2Q4G0G5 96 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 CORO6Q6QEF8 472 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ZNF584Q8IVC4 421 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ZDHHC22Q8N966 263 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 OR52N5Q8NH56 324 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 MITD1Q8WV92 249 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 MMABQ96EY8 250 aaPredicted RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 CMKLR1Q99788 373 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ZNF471Q9BX82 626 aaPredicted RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 HHLA2Q9UM44 414 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 PRELID3BQ9Y3B1 194 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 R4GMQ9 66 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ALPK2Q86TB3 2170 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 RAB19A4D1S5 217 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ISG15P05161 165 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 ATP1B3P54709 279 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 TOMM34Q15785 309 aaPredicted RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 TMEM185AQ8NFB2 350 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 MRGPRFQ96AM1 343 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 TCTN2Q96GX1 697 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 GAL3ST1Q99999 423 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 GAREM1Q9H706 876 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 FARSAQ9Y285 508 aaKnown RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 KCNK7Q9Y2U2 307 aa17.14■□□□□ 0.33
RTN4-201ENST00000317610 KLF2Q9Y5W3 355 aaPredicted RBP17.14■□□□□ 0.33
RTN4-201ENST00000317610 CCSO14618 274 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ICOSLGO75144 302 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 DXOO77932 396 aaKnown RBP17.13■□□□□ 0.33
RTN4-201ENST00000317610 PLGP00747 810 aaPredicted RBP17.13■□□□□ 0.33
RTN4-201ENST00000317610 CASRP41180 1078 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 GABRA4P48169 554 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 HYAL4Q2M3T9 481 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 MDGA2Q7Z553 956 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 PARGQ86W56 976 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 LINC00518Q8N0U6 118 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ADOQ96SZ5 270 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ZMAT3Q9HA38 289 aaKnown RBP17.13■□□□□ 0.33
RTN4-201ENST00000317610 KIF26BQ2KJY2 2108 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 A0A0C4DFX4 3053 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 DCDC2BA2VCK2 349 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 TMEM235A6NFC5 223 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 WIPF3A6NGB9 483 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 CAPZA1P52907 286 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ZNF260Q3ZCT1 412 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ZNF542PQ5EBM4 170 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 FAHD2BQ6P2I3 314 aaPredicted RBP17.13■□□□□ 0.33
RTN4-201ENST00000317610 NKAIN3Q8N8D7 197 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 OR4S1Q8NGB4 309 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 ADIPOR1Q96A54 375 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 FAHD2AQ96GK7 314 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 SEC22AQ96IW7 307 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 WBP1LQ9NX94 342 aa17.13■□□□□ 0.33
RTN4-201ENST00000317610 C9orf170A2RU37 121 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 CPED1A4D0V7 1026 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 HCRTR2O43614 444 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 SIGLEC6O43699 453 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 NPIPB7O75200 414 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 ATG12O94817 140 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 PRKACAP17612 351 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms