RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SHARPINQ9H0F6 387 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR2A25A4D2G3 310 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 GPR37O15354 613 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 LPLP06858 475 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 ADRA1AP35348 466 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SP6Q3SY56 376 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 C1orf87Q8N0U7 546 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 NAGKQ9UJ70 344 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 ZNF835Q9Y2P0 537 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 KCNAB3O43448 404 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 WDR1O75083 606 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 DDAH2O95865 285 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 RAB40ALP0C0E4 278 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 PGFP49763 221 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 GNG10P50151 68 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 Q6ZSR9 355 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SIGLECL1Q8N7X8 197 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR10G3Q8NGC4 313 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SPHK1Q9NYA1 384 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 CYB5R1Q9UHQ9 305 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 PRAMEF26H0Y7S4 382 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 DUSP5Q16690 384 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 PPP1R3BQ86XI6 285 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 KLK11Q9UBX7 282 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 NUP188Q5SRE5 1749 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 SIGLEC5O15389 551 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 GPX5O75715 221 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 RPL7P18124 248 aaKnown RBP11.56□□□□□ -0.56
USP38-201ENST00000307017 DCTDP32321 178 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 PFN3P60673 137 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 UBE2G1P62253 170 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 BTG2P78543 158 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 BAK1Q16611 211 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ZNF626Q68DY1 528 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 RPUSD3Q6P087 351 aaKnown RBP11.56□□□□□ -0.56
USP38-201ENST00000307017 MARCH1Q8TCQ1 289 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 MUCL1Q96DR8 90 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 GPR75O95800 540 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ENPP1P22413 925 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 EPHA2P29317 976 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ID4P47928 161 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
USP38-201ENST00000307017 CCL4L1Q8NHW4 92 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 PDXPQ96GD0 296 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 A8MVM7 634 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ZFAND5O76080 213 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 H2AFB1P0C5Y9 115 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 HTR1FP30939 366 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 FABP5Q01469 135 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 AGERQ15109 404 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 OR13D1Q8NGV5 346 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
USP38-201ENST00000307017 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
USP38-201ENST00000307017 HBG1P69891 147 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 HBG2P69892 147 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 GDPD3Q7L5L3 318 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 SPRED1Q7Z699 444 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 OR10X1Q8NGY0 326 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 C4AP0C0L4 1744 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 C4BP0C0L5 1744 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ZNF487B1APH4 448 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 FUNDC1Q8IVP5 155 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 CMTM4Q8IZR5 234 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 ZNF385DQ9H6B1 395 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 PARD6AQ9NPB6 346 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 NUMBLQ9Y6R0 609 aa11.56□□□□□ -0.56
USP38-201ENST00000307017 TGOLN2O43493 480 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 ZNF385BQ569K4 471 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 MFSD9Q8NBP5 474 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 PRAMEF25A6NGN4 478 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 Q499Y3 187 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 Q6ZNX1 250 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 PPP1R35Q8TAP8 253 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 SLC7A6Q92536 515 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 G3V3Q6 166 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 ADRB1P08588 477 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 SSR4P51571 173 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 SUMO1P63165 101 aaKnown RBP11.55□□□□□ -0.56
USP38-201ENST00000307017 OR4C5Q8NGB2 326 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 SCARB1Q8WTV0 552 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 PIGQQ9BRB3 760 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 MED29Q9NX70 200 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 HOXC11O43248 304 aaPredicted RBP11.55□□□□□ -0.56
USP38-201ENST00000307017 NAGAP17050 411 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 HSF1Q00613 529 aa11.55□□□□□ -0.56
USP38-201ENST00000307017 OR1M1Q8NGA1 313 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms