RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CCDC182A6NF36 153 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 H0YAE9 185 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 RER1O15258 196 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 SGCEO43556 437 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 CLIC3O95833 236 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 SPARCP09486 303 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 LOXP28300 417 aaPredicted RBP21.26■□□□□ 0.99
HOXC9-201ENST00000303450 SSTR2P30874 369 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 RPS27P42677 84 aaKnown RBP21.26■□□□□ 0.99
HOXC9-201ENST00000303450 CDH11P55287 796 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 ZNF774Q6NX45 483 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 ZNF584Q8IVC4 421 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 IL17RDQ8NFM7 739 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 OR6N2Q8NGY6 317 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 RFKQ969G6 155 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 ZNF582Q96NG8 517 aaPredicted RBP21.26■□□□□ 0.99
HOXC9-201ENST00000303450 HS3ST6Q96QI5 342 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 C1orf198Q9H425 327 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 MARCH7Q9H992 704 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 PLEK2Q9NYT0 353 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 RNF115Q9Y4L5 304 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 CENPEQ02224 2701 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 NBPF19A0A087WUL8 3843 aa21.26■□□□□ 0.99
HOXC9-201ENST00000303450 DOK2O60496 412 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 CRYAAP02489 173 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 IL5RAQ01344 420 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 NAAAQ02083 359 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 TEX30Q5JUR7 227 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 SLC25A30Q5SVS4 291 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 ZNF691Q5VV52 312 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 MEDAGQ5VYS4 303 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 SLC18B1Q6NT16 456 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 TMEM200AQ86VY9 491 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 TIGD4Q8IY51 512 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 CPEB3Q8NE35 698 aaKnown RBP21.25■□□□□ 0.99
HOXC9-201ENST00000303450 SLC30A7Q8NEW0 376 aa21.25■□□□□ 0.99
HOXC9-201ENST00000303450 GDF2Q9UK05 429 aaPredicted RBP21.25■□□□□ 0.99
HOXC9-201ENST00000303450 APEX1P27695 318 aaKnown RBP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 APLNRP35414 380 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 VHLP40337 213 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 NAA10P41227 235 aaPredicted RBP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 IL18R1Q13478 541 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 OCLNQ16625 522 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 ADAM5Q6NVV9 412 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 SLC22A25Q6T423 547 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 IZUMO2Q6UXV1 221 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 SETD9Q8NE22 299 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 RHOXF1Q8NHV9 184 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 RADILQ96JH8 1075 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 CLEC4MQ9H2X3 399 aaPredicted RBP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 AASSQ9UDR5 926 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 WARS2Q9UGM6 360 aaKnown RBP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 SELENOFO60613 162 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 ENTPD6O75354 484 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 GABRB1P18505 474 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 STOMP27105 288 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 HTR1FP30939 366 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 HIST1H3AP68431 136 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 SPOCK1Q08629 439 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 PCK2Q16822 640 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 HIST2H3PS2Q5TEC6 136 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 TMEM154Q6P9G4 183 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 HIST2H3AQ71DI3 136 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 VASH1Q7L8A9 365 aaPredicted RBP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 SHFQ7M4L6 423 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 DPY19L4Q7Z388 723 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 OR1J2Q8NGS2 313 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 TFAP2CQ92754 450 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 Q96MT0 163 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 CLN6Q9NWW5 311 aa21.24■□□□□ 0.99
HOXC9-201ENST00000303450 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.24■□□□□ 0.99
HOXC9-201ENST00000303450 RTTNQ86VV8 2226 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 SNTNA6NMZ2 147 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 RAB35Q15286 201 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 TBC1D28Q2M2D7 210 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 CCDC92Q53HC0 331 aaPredicted RBP21.23■□□□□ 0.99
HOXC9-201ENST00000303450 ZNF704Q6ZNC4 412 aaPredicted RBP21.23■□□□□ 0.99
HOXC9-201ENST00000303450 CFAP77Q6ZQR2 320 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 DCXRQ7Z4W1 244 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 CNN2Q99439 309 aaKnown RBP21.23■□□□□ 0.99
HOXC9-201ENST00000303450 TMEM204Q9BSN7 226 aa21.23■□□□□ 0.99
HOXC9-201ENST00000303450 DCHS2Q6V1P9 2916 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 ROS1P08922 2347 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 IGHV2OR16-5A0A0B4J2B6 119 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 PLAUP00749 431 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 MRPL3P09001 348 aaKnown RBP21.22■□□□□ 0.99
HOXC9-201ENST00000303450 PSKH1P11801 424 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 CCL2P13500 99 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 HTR5AP47898 357 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 GDI2P50395 445 aaKnown RBP21.22■□□□□ 0.99
HOXC9-201ENST00000303450 GGTLC2Q14390 218 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 ELFN2Q5R3F8 820 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 C6orf52Q5T4I8 152 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 SLC16A9Q7RTY1 509 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 HDHD2Q9H0R4 259 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 CDH20Q9HBT6 801 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 HAO2Q9NYQ3 351 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 POU2F3Q9UKI9 436 aa21.22■□□□□ 0.99
HOXC9-201ENST00000303450 CELSR2Q9HCU4 2923 aa21.21■□□□□ 0.99
HOXC9-201ENST00000303450 ATP6V1G2-DDX39BF2Z307 99 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms