RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGLV3-16A0A075B6K0 115 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 NPIPB9F8W1W9 429 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 HLA-DQA2P01906 255 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 ITGB2P05107 769 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 NGFRP08138 427 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 HOXC4P09017 264 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 SPARCP09486 303 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 RAB32Q13637 225 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 MPPED2Q15777 294 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 GLYATL3Q5SZD4 288 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 CBARPQ8N350 705 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 OR6N2Q8NGY6 317 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 SCARF2Q96GP6 870 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 MS4A8Q9BY19 250 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 MPDZO75970 2070 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 GEMIN2O14893 280 aaKnown RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 MBPP02686 304 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 F13BP05160 661 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 CD14P08571 375 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 RGS19P49795 217 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 SLC24A5Q71RS6 500 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 FAM174AQ8TBP5 190 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 SNX22Q96L94 193 aa13.03□□□□□ -0.32
CDT1-201ENST00000301019 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
CDT1-201ENST00000301019 CHD3Q12873 2000 aaKnown RBP13.02□□□□□ -0.32
CDT1-201ENST00000301019 A0A087WZY1 265 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 CRHP06850 196 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 HRH1P35367 487 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 CDX1P47902 265 aaPredicted RBP13.02□□□□□ -0.32
CDT1-201ENST00000301019 GNG10P50151 68 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 AFF3P51826 1226 aaKnown RBP13.02□□□□□ -0.32
CDT1-201ENST00000301019 RAP1AP62834 184 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 NKAIN1Q4KMZ8 207 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 RNASE10Q5GAN6 216 aaKnown RBP13.02□□□□□ -0.32
CDT1-201ENST00000301019 OR2T2Q6IF00 324 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 FAM180AQ6UWF9 173 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 DPY19L4Q7Z388 723 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 GLYATL1Q969I3 302 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 TCTN2Q96GX1 697 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 ARHGDIGQ99819 225 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 RARRES2Q99969 163 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 HSF4Q9ULV5 492 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 MMACHCQ9Y4U1 282 aa13.02□□□□□ -0.32
CDT1-201ENST00000301019 CD8AP01732 235 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 CXCL1P09341 107 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 FOLR2P14207 255 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 SERPINA2P20848 420 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 MAOAP21397 527 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 ZNF345Q14585 488 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 Q499Y3 187 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 LEG1Q6P5S2 330 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 FBXO46Q6PJ61 603 aaPredicted RBP13.02□□□□□ -0.33
CDT1-201ENST00000301019 OR2L13Q8N349 312 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 OR56B1Q8NGI3 324 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 KLK13Q9UKR3 277 aa13.02□□□□□ -0.33
CDT1-201ENST00000301019 STK17BO94768 372 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 CPMP14384 443 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 HOXA5P20719 270 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 TAS2R19P59542 299 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ACTC1P68032 377 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ACTA1P68133 377 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 NKX6-1P78426 367 aaPredicted RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 SRSF5Q13243 272 aaKnown RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 TRMT12Q53H54 448 aaKnown RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 SLC39A5Q6ZMH5 540 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 CHST9Q7L1S5 443 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ZNF584Q8IVC4 421 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 GATSQ8NAP1 163 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 OR51A2Q8NGJ7 313 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 S100A13Q99584 98 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 AIF1LQ9BQI0 150 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 OR52A5Q9H2C5 316 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 PTGES2Q9H7Z7 377 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 CBLN4Q9NTU7 201 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 A0A1B0GWJ7 208 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 IFNGP01579 166 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 OR2T7P0C7T2 308 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ELFN1P0C7U0 828 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 CD96P40200 585 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ZNF136P52737 540 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ACTA2P62736 377 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ACTG2P63267 376 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ZNF550Q7Z398 422 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms