RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR8U1Q8NH10 309 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RDH5Q92781 318 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLAMF6Q96DU3 332 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FAM173AQ9BQD7 235 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MED29Q9NX70 200 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 B3GAT1Q9P2W7 334 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MUTYHQ9UIF7 546 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PDGFAP04085 211 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRPH2P23942 346 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OPRM1P35372 400 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PPP2CBP62714 309 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PPP2CAP67775 309 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DEFA6Q01524 100 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRSS36Q5K4E3 855 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CLDN22Q8N7P3 220 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ANKLE1Q8NAG6 615 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CSF3RQ99062 836 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DDOQ99489 341 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZDHHC5Q9C0B5 715 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MMACHCQ9Y4U1 282 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LRRC30A6NM36 301 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMPRSS11DO60235 418 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EIF2DP41214 584 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRAMEF6Q5VXH4 476 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RD3LP0DJH9 198 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CD27P26842 260 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LIPNQ5VXI9 398 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 KCTD12Q96CX2 325 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EPHX3Q9H6B9 360 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ISG20L2Q9H9L3 353 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LGALS8O00214 317 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR2J2O76002 312 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EXOSC2Q13868 293 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DEFB109BQ30KR1 87 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 AVPI1Q5T686 147 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZBED3Q96IU2 234 aaPredicted RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SDF2Q99470 211 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CHST6Q9GZX3 395 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ACER3Q9NUN7 267 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MEX3AA1L020 520 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF133P52736 654 aaPredicted RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 UBE2IP63279 158 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LPCAT3Q6P1A2 487 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GRINAQ7Z429 371 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NMES1Q9C002 83 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TNFRSF12AQ9NP84 129 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 KLK4Q9Y5K2 254 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A0A0A6YYJ9 748 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A0A1W2PRV1 198 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ABLIM3O94929 683 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 F6UZH7 168 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HBE1P02100 147 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FUCA1P04066 466 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CDAP32320 146 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CHRNA9Q9UGM1 479 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FABP6P51161 128 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SNRPNP63162 240 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RNF151Q2KHN1 245 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NKAIN1Q4KMZ8 207 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ROBO4Q8WZ75 1007 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NIPSNAP3BQ9BS92 247 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RTL8AQ9BWD3 113 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EXT1Q16394 746 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM179BQ7Z7N9 219 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 AK3Q9UIJ7 227 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DAPP1Q9UN19 280 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLCO1B1Q9Y6L6 691 aa12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MYO18AQ92614 2054 aaKnown RBP12.38□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PMS2P2O95744 297 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms