RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TRAV14DV4A0A0A6YYC5 116 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 LTBRP36941 435 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 SGCBQ16585 318 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 TEX30Q5JUR7 227 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 LY6G6FQ5SQ64 297 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 OR4D6Q8NGJ1 314 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF285Q96NJ3 590 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 CKLFQ9UBR5 152 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 SPAG17Q6Q759 2223 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 FASLGP48023 281 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 GLT8D1Q68CQ7 371 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 OR52W1Q6IF63 320 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 FAM166AQ6J272 317 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 STEAP2Q8NFT2 490 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 SLC41A2Q96JW4 573 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 EMC6Q9BV81 110 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 KLK13Q9UKR3 277 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 VDAC3Q9Y277 283 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 ASCC3Q8N3C0 2202 aaKnown RBP21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 LOC107986453A0A1B0GWG9 222 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 OR6C65A6NJZ3 312 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 PGCP20142 388 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 CATSPERDQ86XM0 798 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 SLC6A7Q99884 636 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 TXNIPQ9H3M7 391 aa21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 PRMT8Q9NR22 394 aaPredicted RBP21.87■■□□□ 1.09
SPTSSA-201ENST00000298130 BLACEA4D250 179 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 C2CD4DB7Z1M9 353 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 C12orf45Q8N5I9 185 aaPredicted RBP21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 OR1S1Q8NH92 325 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 OR1L3Q8NH93 324 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 NUDT22Q9BRQ3 303 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 WWTR1Q9GZV5 400 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 WDR13Q9H1Z4 485 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 PFDN2Q9UHV9 154 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 MRTO4Q9UKD2 239 aaKnown RBP21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 ARID1AO14497 2285 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 FAM25EA8MYX2 175 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 PLPP3O14495 311 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 PHYHO14832 338 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 TSPAN2O60636 221 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 CD2P06729 351 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 SLC6A8P48029 635 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 CCR5P51681 352 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 PMPCAQ10713 525 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 ELOCQ15369 112 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 ATPAF1Q5TC12 328 aaPredicted RBP21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 RNF144BQ7Z419 303 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 BPIFB2Q8N4F0 458 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF454Q8N9F8 522 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 GPR27Q9NS67 375 aa21.86■■□□□ 1.09
SPTSSA-201ENST00000298130 TLCD2A6NGC4 264 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 HMSDA8MTL9 139 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ITGB2P05107 769 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ZP3P21754 424 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ARL4DP49703 201 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 KCTD18Q6PI47 426 aaPredicted RBP21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 CHST4Q8NCG5 386 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 SPACA5Q96QH8 159 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 VPS13AQ96RL7 3174 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 WIPF3A6NGB9 483 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF354AO60765 605 aaPredicted RBP21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 B3GALNT1O75752 331 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 OR7A5Q15622 319 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF546Q86UE3 836 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 OR52N5Q8NH56 324 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 ST8SIA4Q92187 359 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 PELOQ9BRX2 385 aaKnown RBP21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 PPA2Q9H2U2 334 aa21.85■■□□□ 1.09
SPTSSA-201ENST00000298130 IGKV3D-11A0A0A0MRZ8 115 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 ALG1L2C9J202 215 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 CYB5AP00167 134 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 FOLR1P15328 257 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 TAS2R19P59542 299 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 TAF13Q15543 124 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 C3orf33Q6P1S2 294 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 RHOUQ7L0Q8 258 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 BEST3Q8N1M1 668 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 TMEM185BQ9H7F4 350 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 CTSFQ9UBX1 484 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 NOP16Q9Y3C1 178 aaKnown RBP21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 TMEM269A0A1B0GVZ9 245 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF736B4DX44 427 aaPredicted RBP21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 TMEM127O75204 238 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 GMFBP60983 142 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 GLO1Q04760 184 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 ATRAIDQ6UW56 229 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 NUDCD2Q8WVJ2 157 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 ASB17Q8WXJ9 295 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 FOXQ1Q9C009 403 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 NUP210LQ5VU65 1888 aa21.84■■□□□ 1.09
SPTSSA-201ENST00000298130 H3BML4 177 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 GNALP38405 381 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 DHRS2Q13268 280 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 ELAVL1Q15717 326 aaKnown RBP21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 ZNF75AQ96N20 296 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 PDCD10Q9BUL8 212 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 PLEKHA6Q9Y2H5 1048 aa21.83■■□□□ 1.09
SPTSSA-201ENST00000298130 AHSA1O95433 338 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 POLR2HP52434 150 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms