RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 IKZF1Q13422 519 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 UBE2NLQ5JXB2 153 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 KCTD20Q7Z5Y7 419 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 PLPP5Q8NEB5 264 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 C4orf45Q96LM5 186 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 OR8B4Q96RC9 309 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 UCN2Q96RP3 112 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 SPSB2Q99619 263 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF275Q9NSD4 429 aaPredicted RBP8.33□□□□□ -1.08
PRDM9-201ENST00000296682 MGAT4CQ9UBM8 478 aa8.33□□□□□ -1.08
PRDM9-201ENST00000296682 TMEM235A6NFC5 223 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 MT-ATP6P00846 226 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 ITGA5P08648 1049 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 CCL3P10147 92 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 ENPP1P22413 925 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 DNASE1P24855 282 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 FOLR3P41439 243 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 RAD52P43351 418 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 KIR3DL2P43630 455 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 TAS2R20P59543 309 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SLC22A6Q4U2R8 563 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 CCDC58Q4VC31 144 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PMS2CLQ68D20 193 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 CDC20BQ86Y33 519 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 GPX7Q96SL4 187 aaPredicted RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PTDSS2Q9BVG9 487 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 BANF2Q9H503 90 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 LDOC1O95751 146 aaPredicted RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 MPIG6BO95866 241 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 HPXP02790 462 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 VAMP1P23763 118 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PRSS3P35030 304 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 DAP3P51398 398 aaKnown RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PSMA6P60900 246 aaKnown RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 C1orf210Q8IVY1 113 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 DND1Q8IYX4 353 aaKnown RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 CREB3L1Q96BA8 519 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SLAMF6Q96DU3 332 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 S100A13Q99584 98 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SOX7Q9BT81 388 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 FXYD6Q9H0Q3 95 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 MS4A18H0YCH9 400 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 TLX3O43711 291 aaPredicted RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PEX14O75381 377 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 AMY2AP04746 511 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 LAP3P28838 519 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SLC25A1P53007 311 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 SNU13P55769 128 aaKnown RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 DLX5P56178 289 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 TSPAN5P62079 268 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 FAPQ12884 760 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 MS4A18Q3C1V0 323 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 CDNFQ49AH0 187 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 TMEM255AQ5JRV8 349 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 COL27A1Q8IZC6 1860 aaPredicted RBP8.32□□□□□ -1.08
PRDM9-201ENST00000296682 ESX1Q8N693 406 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 OR4S1Q8NGB4 309 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PRRG4Q9BZD6 226 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 NMNAT2Q9BZQ4 307 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 OR51B6Q9H340 312 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 HRASLSQ9HDD0 168 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PILRBQ9UKJ0 227 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 PADI1Q9ULC6 663 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
PRDM9-201ENST00000296682 TRAV1-2A0A0B4J238 106 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 HRGP04196 525 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PSMB1P20618 241 aaKnown RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ITGA3P26006 1051 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 APOBEC1P41238 236 aaKnown RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CCR9P51686 369 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CLDN20P56880 219 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 AP3S2P59780 193 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 IFITM2Q01629 132 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ARFRP1Q13795 201 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 C17orf107Q6ZR85 190 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 NAA40Q86UY6 237 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 KMT5CQ86Y97 462 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 DUSP18Q8NEJ0 188 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SLC26A10Q8NG04 563 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 OR51S1Q8NGJ8 323 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 OR1J4Q8NGS1 313 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 OR52N5Q8NH56 324 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ROBO4Q8WZ75 1007 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 MS4A3Q96HJ5 214 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PGAM5Q96HS1 289 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 EXOSC3Q9NQT5 275 aaKnown RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PLEK2Q9NYT0 353 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ACACAQ13085 2346 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 TECTAO75443 2155 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 UBE2QL1A1L167 161 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 TNFSF11O14788 317 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms