RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZNF879B4DU55 563 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 ARL6IP5O75915 188 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 CPN1P15169 458 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 MSR1P21757 451 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 MAGEB1P43366 347 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 ZNF84P51523 738 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 NR2C2APQ86WQ0 139 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.18■□□□□ 0.82
PTX3-201ENST00000295927 NABP1Q96AH0 204 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 TMEM45BQ96B21 275 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 ZNF416Q9BWM5 594 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 PRRG4Q9BZD6 226 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 NELFAQ9H3P2 528 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 GTF2A1LQ9UNN4 478 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 SLC22A13Q9Y226 551 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 R4GMQ9 66 aa20.18■□□□□ 0.82
PTX3-201ENST00000295927 GPR171O14626 319 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 LSM6P62312 80 aaKnown RBP20.17■□□□□ 0.82
PTX3-201ENST00000295927 ODF4Q2M2E3 257 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 CHMP1BQ7LBR1 199 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 BTLAQ7Z6A9 289 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 TPRA1Q86W33 373 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 CATSPERDQ86XM0 798 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 RDH10Q8IZV5 341 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 PHYHIPQ92561 330 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 PPP1R14AQ96A00 147 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 NOX4Q9NPH5 578 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 NOSIPQ9Y314 301 aaKnown RBP20.17■□□□□ 0.82
PTX3-201ENST00000295927 PCDHGA9Q9Y5G4 932 aaKnown RBP20.17■□□□□ 0.82
PTX3-201ENST00000295927 NCOA6Q14686 2063 aaPredicted RBP20.17■□□□□ 0.82
PTX3-201ENST00000295927 FRYQ5TBA9 3013 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 TRAV1-2A0A0B4J238 106 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 ACOD1A6NK06 481 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 PIN1P1O15428 100 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 IGHG3P01860 377 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 ZNF544Q6NX49 715 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 GPR137CQ8N3F9 429 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 IL17RDQ8NFM7 739 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 AP3S1Q92572 193 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 CAMK2AQ9UQM7 478 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 EMC9Q9Y3B6 208 aa20.17■□□□□ 0.82
PTX3-201ENST00000295927 TRBV5-5A0A0J9YX44 114 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 RGS5O15539 181 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 ZNF169Q14929 603 aaPredicted RBP20.16■□□□□ 0.82
PTX3-201ENST00000295927 Q499Y3 187 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 HSD17B12Q53GQ0 312 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.16■□□□□ 0.82
PTX3-201ENST00000295927 SPACA3Q8IXA5 215 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 OR10AC1Q8NH08 325 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 DERL3Q96Q80 235 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 CRLF2Q9HC73 371 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 EMC3Q9P0I2 261 aa20.16■□□□□ 0.82
PTX3-201ENST00000295927 RER1O15258 196 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 ENDOGQ14249 297 aaKnown RBP20.15■□□□□ 0.82
PTX3-201ENST00000295927 LINGO2Q7L985 606 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 TUSC5Q8IXB3 177 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 ORAI1Q96D31 301 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 ALKBH3Q96Q83 286 aaPredicted RBP20.15■□□□□ 0.82
PTX3-201ENST00000295927 ATF6BQ99941 703 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 B3GAT2Q9NPZ5 323 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 ZNF878C9JN71 531 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 LOC110117498-PIK3R3F6TDL0 507 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 MRPL33O75394 65 aaKnown RBP20.15■□□□□ 0.82
PTX3-201ENST00000295927 OCM2P0CE71 109 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 OR10A3P58181 314 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 GPR148Q8TDV2 347 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 G6PC2Q9NQR9 355 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 CLEC4AQ9UMR7 237 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 CMAHPQ9Y471 501 aa20.15■□□□□ 0.82
PTX3-201ENST00000295927 TMEM269A0A1B0GVZ9 245 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 H3BSH0 61 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 WISP2O76076 250 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 PDGFAP04085 211 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 DCTDP32321 178 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 TNFSF8P32971 234 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 SOX2P48431 317 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 MRPS34P82930 218 aaKnown RBP20.14■□□□□ 0.81
PTX3-201ENST00000295927 RIPPLY2Q5TAB7 128 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 RHOUQ7L0Q8 258 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 CCDC190Q86UF4 302 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 LAX1Q8IWV1 398 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 LRRC18Q8N456 261 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 OR51A4Q8NGJ6 313 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 CPT1CQ8TCG5 803 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 CEP19Q96LK0 163 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 RNF122Q9H9V4 155 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 CALHM2Q9HA72 323 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 BCO1Q9HAY6 547 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 PNRC2Q9NPJ4 139 aaKnown RBP20.14■□□□□ 0.81
PTX3-201ENST00000295927 OR52A1Q9UKL2 312 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 APC2O95996 2303 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 A0A0G2JK05 382 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 SRMP19623 302 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 RAB3BP20337 219 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 RNPS1Q15287 305 aaKnown RBP20.14■□□□□ 0.81
PTX3-201ENST00000295927 C16orf87Q6PH81 154 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 KLHL24Q6TFL4 600 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 SYT9Q86SS6 491 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 CROCCP3Q8IVE0 287 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 MIXL1Q9H2W2 232 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms