RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C12orf73Q69YU5 71 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 CBR4Q8N4T8 237 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 GJC3Q8NFK1 279 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 PLEKHA8Q96JA3 519 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 TRAF4Q9BUZ4 470 aaPredicted RBP23.24■■□□□ 1.31
SSU72-201ENST00000291386 TVP23BQ9NYZ1 205 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 CYB5R1Q9UHQ9 305 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 ATPIF1Q9UII2 106 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 NDRG4Q9ULP0 352 aaKnown RBP23.24■■□□□ 1.31
SSU72-201ENST00000291386 POLR1DQ9Y2S0 133 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 MAST4O15021 2626 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 RTTNQ86VV8 2226 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 LOC100509620A0A075B734 347 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 ICMTO60725 284 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 BAG2O95816 211 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 CD8AP01732 235 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 GYPBP06028 91 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 PAX1P15863 534 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 PCSK6P29122 969 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 GLRXP35754 106 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 EFNB1P98172 346 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 GALK2Q01415 458 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 SNAPC1Q16533 368 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 DEFB113Q30KQ7 82 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 CCDC92Q53HC0 331 aaPredicted RBP23.23■■□□□ 1.31
SSU72-201ENST00000291386 VASH1Q7L8A9 365 aaPredicted RBP23.23■■□□□ 1.31
SSU72-201ENST00000291386 FBXL14Q8N1E6 418 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 MUC15Q8N387 334 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 PAQR4Q8N4S7 273 aaPredicted RBP23.23■■□□□ 1.31
SSU72-201ENST00000291386 OR51L1Q8NGJ5 315 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 TMEM171Q8WVE6 324 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 MED20Q9H944 212 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 HINT3Q9NQE9 182 aaKnown RBP23.23■■□□□ 1.31
SSU72-201ENST00000291386 CBLN4Q9NTU7 201 aa23.23■■□□□ 1.31
SSU72-201ENST00000291386 OVOL3O00110 214 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 PRODHO43272 600 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 SYNGR3O43761 229 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 DOK2O60496 412 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 GLCEO94923 617 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 CCL2P13500 99 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 ZNF823P16415 610 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 GDI2P50395 445 aaKnown RBP23.22■■□□□ 1.31
SSU72-201ENST00000291386 SNTB2Q13425 540 aaKnown RBP23.22■■□□□ 1.31
SSU72-201ENST00000291386 RAB35Q15286 201 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 PCK2Q16822 640 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 TEX30Q5JUR7 227 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 KRT80Q6KB66 452 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 SLC18B1Q6NT16 456 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 PLBD1Q6P4A8 553 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 CPOQ8IVL8 374 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 FOXC2Q99958 501 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 CDADC1Q9BWV3 514 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 MARCH7Q9H992 704 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 PLEK2Q9NYT0 353 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 COMMD3-BMI1R4GMX3 469 aa23.22■■□□□ 1.31
SSU72-201ENST00000291386 OR6C6A6NF89 314 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 VSTM5A8MXK1 200 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 RER1O15258 196 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 THBS4P35443 961 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 POLR2IP36954 125 aaKnown RBP23.21■■□□□ 1.31
SSU72-201ENST00000291386 RAD23AP54725 363 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 ADIPOQQ15848 244 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 SLC35D3Q5M8T2 416 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 C11orf71Q6IPW1 123 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 CXorf56Q9H5V9 222 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 ORC6Q9Y5N6 252 aa23.21■■□□□ 1.31
SSU72-201ENST00000291386 TVP23AA6NH52 213 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 E9PQ18 207 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 ANPEPP15144 967 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 SLC2A5P22732 501 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 ENTPD1P49961 510 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 RPS23P62266 143 aaKnown RBP23.2■■□□□ 1.3
SSU72-201ENST00000291386 ADAM8P78325 824 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 EFNB3Q15768 340 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 ZBTB49Q6ZSB9 765 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 CXXC5Q7LFL8 322 aaKnown RBP23.2■■□□□ 1.3
SSU72-201ENST00000291386 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.2■■□□□ 1.3
SSU72-201ENST00000291386 LRRC75A-AS1Q8N1F1 130 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 ZNF511Q8NB15 262 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 OR6K6Q8NGW6 343 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 OR2AJ1Q8NGZ0 328 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 EME1Q96AY2 570 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 OTULINQ96BN8 352 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 SLC29A1Q99808 456 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 BCL2L14Q9BZR8 327 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 HDHD2Q9H0R4 259 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 OR51V1Q9H2C8 321 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 CXXC4Q9H2H0 198 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 RIBC2Q9H4K1 309 aa23.2■■□□□ 1.3
SSU72-201ENST00000291386 ZNF701Q9NV72 531 aaPredicted RBP23.2■■□□□ 1.3
SSU72-201ENST00000291386 C5orf49A4QMS7 147 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 PRKYO43930 277 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 SERPINF1P36955 418 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 RAD52P43351 418 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 UCP2P55851 309 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 SWI5Q1ZZU3 235 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 MST1LQ2TV78 715 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 ELFN2Q5R3F8 820 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 CORO6Q6QEF8 472 aa23.19■■□□□ 1.3
SSU72-201ENST00000291386 LYPD4Q6UWN0 246 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms