RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LIPNQ5VXI9 398 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 LEG1Q6P5S2 330 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 ANKRD16Q6P6B7 361 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 NFAM1Q8NET5 270 aaPredicted RBP16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 ZNF417Q8TAU3 575 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 TNFAIP8L1Q8WVP5 186 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 Q96M85 177 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 SPSB2Q99619 263 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 FRRS1LQ9P0K9 344 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 MRM2Q9UI43 246 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 TTC28Q96AY4 2481 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 GGT3PA6NGU5 568 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 AKAIN1P0CW23 69 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 MPGP29372 298 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 SOX2P48431 317 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 EMP2P54851 167 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 FBXW4P57775 412 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 PAPD4Q6PIY7 484 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 WDR77Q9BQA1 342 aaPredicted RBP16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 SEMA4CQ9C0C4 833 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 FKRPQ9H9S5 495 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 GPR160Q9UJ42 338 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 FBXL2Q9UKC9 423 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 A0A087WV48 116 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 TRBV5-7A0A0A0MS05 114 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 CFPP27918 469 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ZNF74Q16587 644 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 DCAF12L2Q5VW00 463 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 JAZF1Q86VZ6 243 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ADAD1Q96M93 576 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 DMRTA2Q96SC8 542 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 SLC19A3Q9BZV2 496 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 LAT2Q9GZY6 243 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 MFFQ9GZY8 342 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ZNF346Q9UL40 294 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 TMEM72A0PK05 275 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ALG1L2C9J202 215 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ZNF254O75437 659 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 CER1O95813 267 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ABHD16AO95870 558 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 F13BP05160 661 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 SSBP1Q04837 148 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 DTWD2Q8NBA8 298 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 DUSP19Q8WTR2 217 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 NPAS1Q99742 590 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 ALX4Q9H161 411 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 TMEM138Q9NPI0 162 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 IFT46Q9NQC8 304 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 HRH3Q9Y5N1 445 aa16.44■□□□□ 0.22
PDLIM3-201ENST00000284767 RFPL4AA6NLU0 287 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 FAM171A2A8MVW0 826 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 RFPL4AL1F8VTS6 287 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 CDC40O60508 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 SLC23A3Q6PIS1 610 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 ZNF511Q8NB15 262 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 METTL21AQ8WXB1 218 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 MRPS24Q96EL2 167 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 CRB3Q9BUF7 120 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 DNTTIP1Q9H147 329 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 MMP25Q9NPA2 562 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 TRBV11-1A0A0K0K1C0 115 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 TMEM200CA6NKL6 621 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 CTAG2O75638 210 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 MAS1P04201 325 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 UBBP0CG47 229 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 UBCP0CG48 685 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 PNMTP11086 282 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 APEHP13798 732 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 CDKN2AP42771 156 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 PNLIPRP2P54317 469 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 RPS27AP62979 156 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 UBA52P62987 128 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 C11orf88Q6PI97 169 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 EXD3Q8N9H8 876 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 OR4D10Q8NGI6 311 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 TAAR8Q969N4 342 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 COMMD4Q9H0A8 199 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 SLC6A15Q9H2J7 730 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 KLHDC2Q9Y2U9 406 aa16.43■□□□□ 0.22
PDLIM3-201ENST00000284767 TRAV8-7A0A075B6U6 113 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 TMEM272A0A1B0GTI8 110 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 ADAM10O14672 748 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 YKT6O15498 198 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 NDUFA2O43678 99 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 FADS1O60427 444 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 GTF2F2P13984 249 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 PLA2G7Q13093 441 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 CDC20BQ86Y33 519 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 PXT1Q8NFP0 134 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 OR51S1Q8NGJ8 323 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 OR10Z1Q8NGY1 313 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 TSSK2Q96PF2 358 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 ADAM19Q9H013 955 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 C1orf198Q9H425 327 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 CDV3Q9UKY7 258 aaKnown RBP16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 SLC6A5Q9Y345 797 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 CELSR3Q9NYQ7 3312 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 OR6C76A6NM76 312 aa16.42■□□□□ 0.22
PDLIM3-201ENST00000284767 TMEM212A6NML5 194 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms