RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 LYRM1O43325 122 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 DNPH1O43598 174 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 TRAPPC6AO75865 159 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 F10P00742 488 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ANXA2P07355 339 aaKnown RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ENPP1P22413 925 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 CDAP32320 146 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 EIF1AXP47813 144 aaKnown RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 MMP15P51511 669 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 MMP16P51512 607 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 CLDN12P56749 244 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 CLDN20P56880 219 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 FOXO1Q12778 655 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 TMEM244Q5VVB8 128 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF704Q6ZNC4 412 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ESPNLQ6ZVH7 1005 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ZIC4Q8N9L1 334 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 DNAAF1Q8NEP3 725 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 OR9K2Q8NGE7 335 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 OR2AJ1Q8NGZ0 328 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 SLC39A7Q92504 469 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 NKD1Q969G9 470 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 TMEM54Q969K7 222 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 SLC25A38Q96DW6 304 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 IP6K3Q96PC2 410 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF385AQ96PM9 386 aaKnown RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 OR2M2Q96R28 347 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 SRXN1Q9BYN0 137 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 ABCG5Q9H222 651 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 LIN7BQ9HAP6 207 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 RBFOX1Q9NWB1 397 aaKnown RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 GLTPQ9NZD2 209 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 RABL2AQ9UBK7 228 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 GDF2Q9UK05 429 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 RABL2BQ9UNT1 228 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 FOXJ3Q9UPW0 622 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 MRPS7Q9Y2R9 242 aaKnown RBP8.51□□□□□ -1.05
TRIM55-201ENST00000276573 LHFPL6Q9Y693 200 aa8.51□□□□□ -1.05
TRIM55-201ENST00000276573 EEF1E1O43324 174 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 NEURL1O76050 574 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ADRB1P08588 477 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 NR2C1P13056 603 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CSRP1P21291 193 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ACHEP22303 614 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CSNK1A1P48729 337 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF133P52736 654 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CARD18P57730 90 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 AIMP2Q13155 320 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 WIPI1Q5MNZ9 446 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 PHYHD1Q5SRE7 291 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 STPG1Q5TH74 334 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 AGAP6Q5VW22 663 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 HACD4Q5VWC8 232 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ASPHD2Q6ICH7 369 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 KLHL24Q6TFL4 600 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ASB18Q6ZVZ8 466 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 RHOUQ7L0Q8 258 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 GGNQ86UU5 652 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 TMPRSS12Q86WS5 348 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ENKURQ8TC29 256 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 TRIM63Q969Q1 353 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 INTS12Q96CB8 462 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ZFP3Q96NJ6 502 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 AGAP4Q96P64 663 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SIGLEC12Q96PQ1 595 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 UTP23Q9BRU9 249 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SF3B5Q9BWJ5 86 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 OR2B2Q9GZK3 357 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 FAM206AQ9NX38 181 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ETV7Q9Y603 341 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 MEIOCA2RUB1 952 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 TTLL8A6PVC2 850 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CTDSPLO15194 276 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 GSTZ1O43708 216 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 DOK2O60496 412 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 LRP3O75074 770 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 WDPCPO95876 746 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CD2P06729 351 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CD37P11049 281 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 IGFBP3P17936 291 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ITGA3P26006 1051 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 GDF1P27539 372 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CASRP41180 1078 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 STARP49675 285 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ART1P52961 327 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
TRIM55-201ENST00000276573 GABREP78334 506 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 GPR176Q14439 515 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SGCAQ16586 387 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 SLC36A2Q495M3 483 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 C10orf128Q5T292 105 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 CFAP77Q6ZQR2 320 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 PRSS45Q7RTY3 260 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 ELMOD2Q8IZ81 293 aa8.5□□□□□ -1.05
TRIM55-201ENST00000276573 TMEM123Q8N131 208 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms