RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NCOA6Q14686 2063 aaPredicted RBP14.45□□□□□ -0.1
TPM1-201ENST00000267996 ZNF724A8MTY0 619 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 PIN1P1O15428 100 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 MYL9P24844 172 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 S100A5P33763 92 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 ZNF84P51523 738 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 CAV3P56539 151 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 MRPS34P82930 218 aaKnown RBP14.45□□□□□ -0.1
TPM1-201ENST00000267996 MFGE8Q08431 387 aaPredicted RBP14.45□□□□□ -0.1
TPM1-201ENST00000267996 ENDOGQ14249 297 aaKnown RBP14.45□□□□□ -0.1
TPM1-201ENST00000267996 ZNF544Q6NX49 715 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 SPACA3Q8IXA5 215 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 FNDC9Q8TBE3 224 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 CPT1CQ8TCG5 803 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 DERL3Q96Q80 235 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 COMMD4Q9H0A8 199 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 EXO5Q9H790 373 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 PNRC2Q9NPJ4 139 aaKnown RBP14.45□□□□□ -0.1
TPM1-201ENST00000267996 EMC3Q9P0I2 261 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 FBXL3Q9UKT7 428 aa14.45□□□□□ -0.1
TPM1-201ENST00000267996 TAF4O00268 1085 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 H2BFMP0C1H6 154 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 GUCA1AP43080 201 aaPredicted RBP14.44□□□□□ -0.1
TPM1-201ENST00000267996 MMP16P51512 607 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 HIST1H3AP68431 136 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ZNF169Q14929 603 aaPredicted RBP14.44□□□□□ -0.1
TPM1-201ENST00000267996 RNPS1Q15287 305 aaKnown RBP14.44□□□□□ -0.1
TPM1-201ENST00000267996 INAQ16352 499 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 C3AR1Q16581 482 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 SGCAQ16586 387 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 HIST2H3PS2Q5TEC6 136 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 Q6ZS92 163 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 HIST2H3AQ71DI3 136 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 CCDC190Q86UF4 302 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 CROCCP3Q8IVE0 287 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ZNF676Q8N7Q3 588 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 OR2AJ1Q8NGZ0 328 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 AP3S1Q92572 193 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 HTRA1Q92743 480 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ZNF837Q96EG3 531 aaPredicted RBP14.44□□□□□ -0.1
TPM1-201ENST00000267996 WDFY2Q96P53 400 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ZNF416Q9BWM5 594 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 RBM24Q9BX46 236 aaKnown RBP14.44□□□□□ -0.1
TPM1-201ENST00000267996 LINC00470Q9BZP3 86 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 PALMDQ9NP74 551 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 G6PC2Q9NQR9 355 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 CENPMQ9NSP4 180 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 POLR1DQ9Y2S0 133 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 ACACAQ13085 2346 aa14.44□□□□□ -0.1
TPM1-201ENST00000267996 A0A0G2JK05 382 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 SMIM30A4D0T7 59 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 J3QRK9 145 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 NCR1O76036 304 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 CFL1P23528 166 aaKnown RBP14.43□□□□□ -0.1
TPM1-201ENST00000267996 Q499Y3 187 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 FAM27BQ5VT28 67 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 LINGO2Q7L985 606 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 SIAH3Q8IW03 269 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 GPR137CQ8N3F9 429 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 ATF6BQ99941 703 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 PRDM14Q9GZV8 571 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 ZCCHC4Q9H5U6 513 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 NIPAL2Q9H841 368 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 NOX4Q9NPH5 578 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 B3GAT2Q9NPZ5 323 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 PARPBPQ9NWS1 579 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 SLC22A13Q9Y226 551 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 NOSIPQ9Y314 301 aaKnown RBP14.43□□□□□ -0.1
TPM1-201ENST00000267996 ZNF175Q9Y473 711 aa14.43□□□□□ -0.1
TPM1-201ENST00000267996 URB1O60287 2271 aaKnown RBP14.43□□□□□ -0.1
TPM1-201ENST00000267996 TRBV5-7A0A0A0MS05 114 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 ZNF878C9JN71 531 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 AQP7O14520 342 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 NPR2P20594 1047 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 HSD17B12Q53GQ0 312 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CEP78Q5JTW2 689 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CHMP1BQ7LBR1 199 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.42□□□□□ -0.1
TPM1-201ENST00000267996 GPR148Q8TDV2 347 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 SLC24A3Q9HC58 644 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CRLF2Q9HC73 371 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 FAM206AQ9NX38 181 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 EMC9Q9Y3B6 208 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 A0A1W2PPK0 400 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 ACOD1A6NK06 481 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 LOC110117498-PIK3R3F6TDL0 507 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 RER1O15258 196 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 RAF1P04049 648 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 PDGFAP04085 211 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 ISG15P05161 165 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 CTSSP25774 331 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 MAPK3P27361 379 aaPredicted RBP14.42□□□□□ -0.1
TPM1-201ENST00000267996 TNFSF8P32971 234 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 EIF2S3P41091 472 aaKnown RBP14.42□□□□□ -0.1
TPM1-201ENST00000267996 MAGEB1P43366 347 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 ZNF45Q02386 682 aa14.42□□□□□ -0.1
TPM1-201ENST00000267996 STK11Q15831 433 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms