RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PCOLCE2Q9UKZ9 415 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 LRP12Q9Y561 859 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 CABIN1Q9Y6J0 2220 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR14I1A6ND48 311 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 PAPD4Q6PIY7 484 aaKnown RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 TFAP2EQ6VUC0 442 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR2W3Q7Z3T1 314 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 TRAPPC6BQ86SZ2 158 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 EXD3Q8N9H8 876 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR1S2Q8NGQ3 325 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR6K3Q8NGY3 331 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 THAP6Q8TBB0 222 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 SEMA6CQ9H3T2 930 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 HPF1Q9NWY4 346 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 GPN3Q9UHW5 284 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 KLK13Q9UKR3 277 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 TMED7Q9Y3B3 224 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 UBBP0CG47 229 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 UBCP0CG48 685 aaKnown RBP11.15□□□□□ -0.62
CHMP3-201ENST00000263856 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 RPA2P15927 270 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 PI3P19957 117 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 GFERP55789 205 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 RPS27AP62979 156 aaKnown RBP11.15□□□□□ -0.62
CHMP3-201ENST00000263856 UBA52P62987 128 aaKnown RBP11.15□□□□□ -0.62
CHMP3-201ENST00000263856 EGR3Q06889 387 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 PPP1R1AQ13522 171 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 ASPHD2Q6ICH7 369 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF679Q8IYX0 411 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-201ENST00000263856 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 RLN3Q8WXF3 142 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 ABHD6Q9BV23 337 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 PRODH2Q9UF12 536 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 MLXQ9UH92 298 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 SLCO1B1Q9Y6L6 691 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 IFNA6P05013 189 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 HLA-DOBP13765 273 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF823P16415 610 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 MGMTP16455 207 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM151BQ8IW70 566 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 ASB5Q8WWX0 329 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 MCHR2Q969V1 340 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 GPX7Q96SL4 187 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-201ENST00000263856 NPAS1Q99742 590 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
CHMP3-201ENST00000263856 SPAG17Q6Q759 2223 aa11.15□□□□□ -0.63
CHMP3-201ENST00000263856 LOC107986453A0A1B0GWG9 222 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 H0YIG0 161 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 PMP2P02689 132 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 IL11P20809 199 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 AGTR1P30556 359 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 DMWDQ09019 674 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 KCTD18Q6PI47 426 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 FJX1Q86VR8 437 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF440Q8IYI8 595 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 UTP23Q9BRU9 249 aaKnown RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 SLC19A3Q9BZV2 496 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 CST11Q9H112 138 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF768Q9H5H4 540 aaKnown RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 MRPL22Q9NWU5 206 aaKnown RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 EPHA6Q9UF33 1036 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 PCDHB10Q9UN67 800 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 VSIG4Q9Y279 399 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 AQP8O94778 261 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 SEMA4FO95754 770 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 GNB3P16520 340 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 CBLN2Q8IUK8 224 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF101Q8IZC7 436 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF615Q8N8J6 731 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 OR4D6Q8NGJ1 314 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 RPS4Y2Q8TD47 263 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 NUDT22Q9BRQ3 303 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM269A0A1B0GVZ9 245 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ITGB2P05107 769 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 GP1BBP13224 206 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 BDKRB2P30411 391 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 CTHP32929 405 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 INSM1Q01101 510 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 SNTB1Q13884 538 aaKnown RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 C1orf189Q5VU69 101 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 MAMDC2Q7Z304 686 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms