RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SLIRPQ9GZT3 109 aaKnown RBP20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 KCNN2Q9H2S1 579 aa20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 TMEM38BQ9NVV0 291 aa20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 CCDC59Q9P031 241 aaKnown RBP20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 ANKRD11Q6UB99 2663 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-201ENST00000263121 DVL2O14641 736 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 SRSF10O75494 262 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 ZFPL1O95159 310 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 NPR2P20594 1047 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 FAM27BQ5VT28 67 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 RHOUQ7L0Q8 258 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 FGD2Q7Z6J4 655 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 PRSS35Q8N3Z0 413 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 C4orf45Q96LM5 186 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 SLC7A10Q9NS82 523 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 GALNT8Q9NY28 637 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 PHF3Q92576 2039 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 OR4C45A6NMZ5 311 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 AGTR1P30556 359 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 ROR2Q01974 943 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 STK11Q15831 433 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 CEACAM16Q2WEN9 425 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 LINC00303Q3SY05 128 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 NUFIP2Q7Z417 695 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 OR13C5Q8NGS8 318 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 MED18Q9BUE0 208 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 PNRC2Q9NPJ4 139 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 FBXL3Q9UKT7 428 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNF281Q9Y2X9 895 aa20.16■□□□□ 0.82
SMARCB1-201ENST00000263121 RPL36A-HNRNPH2H7BZ11 118 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 CLPXO76031 633 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 PNPP00491 289 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 SERPINA3P01011 423 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 IL1AP01583 271 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 H2BFMP0C1H6 154 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 RPS19P39019 145 aaKnown RBP20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 KIR3DL2P43630 455 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 CCR9P51686 369 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 HIST1H3AP68431 136 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 WDR38Q5JTN6 314 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 HIST2H3PS2Q5TEC6 136 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 UNQ6494/PRO21346Q6UXR6 183 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 HIST2H3AQ71DI3 136 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 P4HA3Q7Z4N8 544 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 Q8NA96 180 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 OR5M9Q8NGP3 310 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 RGP1Q92546 391 aaPredicted RBP20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 APH1AQ96BI3 265 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 GMPPAQ96IJ6 420 aaPredicted RBP20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 TRIB1Q96RU8 372 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNF71Q9NQZ8 489 aaPredicted RBP20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 GLRX2Q9NS18 164 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 CENPMQ9NSP4 180 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 R4GMQ9 66 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 PTPRQQ9UMZ3 2332 aa20.15■□□□□ 0.82
SMARCB1-201ENST00000263121 ZNF878C9JN71 531 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 RER1O15258 196 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 SS18L1O75177 396 aaPredicted RBP20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 DCTDP32321 178 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 MFGE8Q08431 387 aaPredicted RBP20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 ACSM3Q53FZ2 586 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 YIF1BQ5BJH7 314 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF324BQ6AW86 544 aaPredicted RBP20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 FAM180AQ6UWF9 173 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 OR5AK2Q8NH90 309 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 TBC1D15Q8TC07 691 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 FOXB1Q99853 325 aa20.14■□□□□ 0.81
SMARCB1-201ENST00000263121 TMEM212A6NML5 194 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 AHRRA9YTQ3 701 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 KRT33AO76009 404 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 CDRT1O95170 752 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 IGHV3-9P01782 118 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 FAM87AP0C7U9 286 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 PAX7P23759 505 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 CEACAM19Q7Z692 300 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 CATSPERDQ86XM0 798 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 IL17RDQ8NFM7 739 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 PPIL3Q9H2H8 161 aaKnown RBP20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 TUBD1Q9UJT1 453 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 SHISA3A0PJX4 238 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 CST2P09228 141 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 SDC2P34741 201 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 GUSBP1Q15486 140 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 NRN1LQ496H8 165 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 ACSF3Q4G176 576 aaPredicted RBP20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 ZMAT1Q5H9K5 638 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 UNQ9370/PRO34162Q6UXP9 181 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 LRRC18Q8N456 261 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 TEX19Q8NA77 164 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 GJC3Q8NFK1 279 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 WNT2BQ93097 391 aa20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 NXF2Q9GZY0 626 aaKnown RBP20.13■□□□□ 0.81
SMARCB1-201ENST00000263121 GATBO75879 557 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 KRTCAP3Q53RY4 240 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF544Q6NX49 715 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 PAMR1Q6UXH9 720 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF100Q8IYN0 542 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 ZCCHC14Q8WYQ9 949 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 FBXO17Q96EF6 278 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms