RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 SRMP19623 302 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 PDCD1Q15116 288 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 FAM213BQ8TBF2 198 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 TREM2Q9NZC2 230 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 GPR55Q9Y2T6 319 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 GABARAPO95166 117 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 ELLP55199 621 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 AGERQ15109 404 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 UBL7Q96S82 380 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 METTL17Q9H7H0 456 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 C19orf53Q9UNZ5 99 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 IGLV3-27P01718 113 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 NME2P22392 152 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 TRIP6Q15654 476 aaKnown RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 MT-CO3P00414 261 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 BMP5P22003 454 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 DPF1Q92782 380 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
SPG11-201ENST00000261866 ONECUT1Q9UBC0 465 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 GHRLQ9UBU3 117 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 CORINQ9Y5Q5 1042 aa11.08□□□□□ -0.64
SPG11-201ENST00000261866 DNAJB6O75190 326 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 RPL18Q07020 188 aaKnown RBP11.07□□□□□ -0.64
SPG11-201ENST00000261866 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FAM96BQ9Y3D0 163 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 A0A0B4J203 849 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FADS1O60427 444 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 C5orf46Q6UWT4 87 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 ARL11Q969Q4 196 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 SARAFQ96BY9 339 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FN3KRPQ9HA64 309 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 SLC23A1Q9UHI7 598 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 GPANK1O95872 356 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 ETV1P50549 477 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 ZNF766Q5HY98 468 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 HES3Q5TGS1 186 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 PTRH1Q86Y79 214 aaKnown RBP11.07□□□□□ -0.64
SPG11-201ENST00000261866 OR10J5Q8NHC4 309 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 POFUT1Q9H488 388 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 IGHV5-51A0A0C4DH38 117 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 MEIOCA2RUB1 952 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 UPK1AO00322 258 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CRYAAP02489 173 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 TPT1P13693 172 aaKnown RBP11.07□□□□□ -0.64
SPG11-201ENST00000261866 ZNF83P51522 516 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CNTRLQ7Z7A1 2325 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 A0A1W2PPH5 198 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FUOMA2VDF0 154 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FIGNL2A6NMB9 653 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CDK4P11802 303 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 MFGE8Q08431 387 aaPredicted RBP11.07□□□□□ -0.64
SPG11-201ENST00000261866 ZNF454Q8N9F8 522 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FAM53CQ9NYF3 392 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CROCCQ5TZA2 2017 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 SPRY1O43609 319 aaPredicted RBP11.07□□□□□ -0.64
SPG11-201ENST00000261866 FPR3P25089 353 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 PRSS41Q7RTY9 318 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CLCF1Q9UBD9 225 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 FER1L6Q2WGJ9 1857 aa11.07□□□□□ -0.64
SPG11-201ENST00000261866 CCDC187A0A096LP49 1063 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 A0A1W2PS29 197 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 EIF4E2O60573 245 aaKnown RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 LGI1O95970 557 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 PTTG1O95997 202 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 PRPH2P23942 346 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 IL3RAP26951 378 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 BARX1Q9HBU1 254 aaPredicted RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 PURGQ9UJV8 347 aaKnown RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 CHST2Q9Y4C5 530 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 TIMM10BQ9Y5J6 103 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 MEIKINA0A087WXM9 373 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 NAP1L6A6NFF2 107 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 CRXO43186 299 aaPredicted RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 ZDHHC11BP0C7U3 371 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 PCBP3P57721 371 aaKnown RBP11.06□□□□□ -0.64
SPG11-201ENST00000261866 C3AR1Q16581 482 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 OR51A4Q8NGJ6 313 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 OR51A2Q8NGJ7 313 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 PSORS1C1Q9UIG5 152 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 KCNE3Q9Y6H6 103 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 A0A1B0GTL3 188 aa11.06□□□□□ -0.64
SPG11-201ENST00000261866 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms