RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 OR1D2P34982 312 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CBX2Q14781 532 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 C11orf87Q6NUJ2 197 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 LCTLQ6UWM7 567 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NECAP1Q8NC96 275 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 LRRC15Q8TF66 581 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ATF6BQ99941 703 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC25A21Q9BQT8 299 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 TWSG1Q9GZX9 223 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CST9LQ9H4G1 147 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 APOBEC3GQ9HC16 384 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 B3GALT1Q9Y5Z6 326 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 AUP1Q9Y679 476 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 MEIS3P1A6NDR6 274 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB27BO00194 218 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 WNT9AO14904 365 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR37L1O60883 481 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 OR6A2O95222 327 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CST3P01034 146 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 F13BP05160 661 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CXCL3P19876 107 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PMCHP20382 165 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CTBP1Q13363 440 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GPM6BQ13491 265 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GABRA6Q16445 453 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 DHRS11Q6UWP2 260 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CLEC20AQ6ZU45 233 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 OR10P1Q8NGE3 313 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NKD1Q969G9 470 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 BARHL1Q9BZE3 327 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 OR51I1Q9H343 314 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 C9orf170A2RU37 121 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 TPST2O60704 377 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 TRGC2P03986 189 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ATP1B1P05026 303 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SYPP08247 313 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 MGST1P10620 155 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 F3P13726 295 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC6A12P48065 614 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GDF10P55107 478 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 RBM11P57052 281 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 C17orf67Q0P5P2 114 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 HYAL1Q12794 435 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC25A52Q3SY17 297 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 RGL4Q8IZJ4 473 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF676Q8N7Q3 588 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 FNDC9Q8TBE3 224 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PGLYRP2Q96PD5 576 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 MBOAT4Q96T53 435 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 AMBRA1Q9C0C7 1298 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 TUBA4BQ9H853 241 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 DNMT3BQ9UBC3 853 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 UTS2RQ9UKP6 389 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 IKZF2Q9UKS7 526 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF835Q9Y2P0 537 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 YTHDF2Q9Y5A9 579 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 V9GYH0 126 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 A0A0U1RQV5 110 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4C45A6NMZ5 311 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 A8MWP6 167 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SAP18O00422 153 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SOCS6O14544 535 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 HLA-DQB2P05538 268 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CD5P06127 495 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 HIST1H1TP22492 207 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NPBWR2P48146 333 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PNRC1Q12796 327 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB40BQ12829 278 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CCL14Q16627 93 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 JSRP1Q96MG2 331 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CNN2Q99439 309 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PRR14Q9BWN1 585 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ASB6Q9NWX5 421 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NTMQ9P121 344 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NDOR1Q9UHB4 597 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 NAT8Q9UHE5 227 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF736B4DX44 427 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 H2AFB1P0C5Y9 115 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PSMB6P28072 239 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 KDELR2P33947 212 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC6A11P48066 632 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 POU2AF1Q16633 256 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 PLBD1Q6P4A8 553 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CEACAM20Q6UY09 585 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GALNT16Q8N428 558 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC25A31Q9H0C2 315 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5AC2Q9NZP5 309 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CSAG2Q9Y5P2 127 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 TCRBV7S3A2A0A539 114 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 FTCDNL1E5RQL4 147 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 LCATP04180 440 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 CD14P08571 375 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 GNB3P16520 340 aa6.17□□□□□ -1.42
PDGFRA-201ENST00000257290 PCMT1P22061 227 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms