RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 HMG20AQ9NP66 347 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 CENPMQ9NSP4 180 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 POLR1DQ9Y2S0 133 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 A0A1W2PPK0 400 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF879B4DU55 563 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 PIN1P1O15428 100 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ARL6IP5O75915 188 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 WISP2O76076 250 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 PDGFAP04085 211 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 H2BFMP0C1H6 154 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 EIF2S3P41091 472 aaKnown RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 GUCA1AP43080 201 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF169Q14929 603 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 RIPPLY2Q5TAB7 128 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 RHOUQ7L0Q8 258 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 LINGO2Q7L985 606 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF416Q9BWM5 594 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 RNF122Q9H9V4 155 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 BCO1Q9HAY6 547 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 SMURF1Q9HCE7 757 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 CRNNQ9UBG3 495 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 ANKRD11Q6UB99 2663 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 TRAV1-2A0A0B4J238 106 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 TRBV5-5A0A0J9YX44 114 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 A0A1B0GVC2 190 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 J3QRK9 145 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 RER1O15258 196 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 NCR1O76036 304 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 MYL9P24844 172 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 DCTDP32321 178 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 S100A5P33763 92 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF84P51523 738 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 MRPS34P82930 218 aaKnown RBP13.42□□□□□ -0.26
HDHD3-201ENST00000238379 ENDOGQ14249 297 aaKnown RBP13.42□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 Q6ZS92 163 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 CHMP1BQ7LBR1 199 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 TUSC5Q8IXB3 177 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 RDH10Q8IZV5 341 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF676Q8N7Q3 588 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 PPP1R14AQ96A00 147 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 TAAR6Q96RI8 345 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 PRRG4Q9BZD6 226 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 COMMD4Q9H0A8 199 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 PNRC2Q9NPJ4 139 aaKnown RBP13.42□□□□□ -0.26
HDHD3-201ENST00000238379 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 DKK4Q9UBT3 224 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 NOSIPQ9Y314 301 aaKnown RBP13.42□□□□□ -0.26
HDHD3-201ENST00000238379 R4GMQ9 66 aa13.42□□□□□ -0.26
HDHD3-201ENST00000238379 ACOD1A6NK06 481 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF724A8MTY0 619 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 K7EM74 188 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 MRPL33O75394 65 aaKnown RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 MAGEB1P43366 347 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 MMP16P51512 607 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 RNPS1Q15287 305 aaKnown RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 INAQ16352 499 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 Q499Y3 187 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 FAM27BQ5VT28 67 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 BTLAQ7Z6A9 289 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 OR10AC1Q8NH08 325 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 CPT1CQ8TCG5 803 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 DERL3Q96Q80 235 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 ALKBH3Q96Q83 286 aaPredicted RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 NOX4Q9NPH5 578 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 CAMK2AQ9UQM7 478 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 EMC9Q9Y3B6 208 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF878C9JN71 531 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 HSD17B12Q53GQ0 312 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 GPR148Q8TDV2 347 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 AP3S1Q92572 193 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 PRDM14Q9GZV8 571 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 SLC24A3Q9HC58 644 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 G6PC2Q9NQR9 355 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 PARPBPQ9NWS1 579 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 CLEC4AQ9UMR7 237 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 GTF2A1LQ9UNN4 478 aa13.41□□□□□ -0.26
HDHD3-201ENST00000238379 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 PRRC2CQ9Y520 2896 aaKnown RBP13.41□□□□□ -0.26
HDHD3-201ENST00000238379 DMXL2Q8TDJ6 3036 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 A0A0G2JK05 382 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 TMEM269A0A1B0GVZ9 245 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 LOC110117498-PIK3R3F6TDL0 507 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 AQP7O14520 342 aa13.4□□□□□ -0.26
HDHD3-201ENST00000238379 TGM6O95932 706 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms