RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TMPPEQ6ZT21 453 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.52
VAMP4-201ENST00000236192 NICN1Q9BSH3 213 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 TUBA4BQ9H853 241 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 FLVCR1Q9Y5Y0 555 aa11.77□□□□□ -0.52
VAMP4-201ENST00000236192 PEX12O00623 359 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 LRRC73Q5JTD7 316 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 GLYATL3Q5SZD4 288 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 IL22RA2Q969J5 263 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
VAMP4-201ENST00000236192 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 TSPAN6O43657 245 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 JMJD7P0C870 316 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 SCAND1P57086 179 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 FXYD4P59646 89 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 CD200R1LQ6Q8B3 271 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 MEX3BQ6ZN04 569 aaKnown RBP11.77□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM169Q96HH4 297 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
VAMP4-201ENST00000236192 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 H3BQ15 152 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TBX19O60806 448 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 CD200P41217 278 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 CTXN1P60606 82 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM35AQ53FP2 167 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 FAM71E1Q6IPT2 247 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 CBARPQ8N350 705 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-201ENST00000236192 MISP3Q96FF7 219 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF337Q9Y3M9 751 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 FITM1A5D6W6 292 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 G3V3Q6 166 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 DLEU1O43261 78 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 FUT1P19526 365 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 HOXC13P31276 330 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TAS2R30P59541 319 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 DOC2BQ14184 412 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 CEBPEQ15744 281 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR8U1Q8NH10 309 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 MR1Q95460 341 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 F6UZH7 168 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 WNT10BO00744 389 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 RAB7AP51149 207 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 PMPCAQ10713 525 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 LRRC25Q8N386 305 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR4K14Q8NGD5 310 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 SMDT1Q9H4I9 107 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 SIRT3Q9NTG7 399 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-201ENST00000236192 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR5V1Q9UGF6 321 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-201ENST00000236192 ST8SIA3O43173 380 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 GJB3O75712 270 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 GALR1P47211 349 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 RING1Q06587 406 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 PHYHD1Q5SRE7 291 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR4D9Q8NGE8 314 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 OR1E3Q8WZA6 343 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 TBX15Q96SF7 602 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 ZDHHC4Q9NPG8 344 aa11.76□□□□□ -0.53
VAMP4-201ENST00000236192 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 H2BFSP57053 126 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 LAS2Q8IYD9 372 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 EXD3Q8N9H8 876 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 SLC17A5Q9NRA2 495 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 DLEC1Q9Y238 1755 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 PLPP7Q8NBV4 271 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 CCDC74AQ96AQ1 378 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 FAM122AQ96E09 287 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 RBM18Q96H35 190 aaKnown RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 ALG12Q9BV10 488 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 PLAGL1Q9UM63 463 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 SLC45A1Q9Y2W3 748 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 LOC102724200A0A096LPH7 203 aaPredicted RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 HSD11B2P80365 405 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 NKAIN4Q8IVV8 208 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 MARCH1Q8TCQ1 289 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF689Q96CS4 500 aaPredicted RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 LCORQ96JN0 433 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms