RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 RASL12Q9NYN1 266 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 MRM2Q9UI43 246 aaKnown RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 NPIPB9F8W1W9 429 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 GPRIN2O60269 458 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 CLN5O75503 358 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 UPK3AO75631 287 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 KLF8O95600 359 aaPredicted RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 PMP2P02689 132 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 CHAF1BQ13112 559 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 IKZF1Q13422 519 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 GAS6Q14393 721 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 HABP2Q14520 560 aaPredicted RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNHIT3Q15649 155 aaPredicted RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF626Q68DY1 528 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 CBLN3Q6UW01 205 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 BAIAP2L2Q6UXY1 529 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 KRT77Q7Z794 578 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 TMPRSS12Q86WS5 348 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 SLC25A36Q96CQ1 311 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 LMF2Q9BU23 707 aaKnown RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 TWSG1Q9GZX9 223 aa8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 COL5A1P20908 1838 aaPredicted RBP8.5□□□□□ -1.05
HLA-DOA-201ENST00000229829 C17orf51A8MQB3 221 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 GLCEO94923 617 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ARG1P05089 322 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 MAOAP21397 527 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ITPKBP27987 946 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 FAUP35544 74 aaKnown RBP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CCR4P51679 360 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 NDUFA6P56556 154 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RAB38P57729 211 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 SKP1P63208 163 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 EEF1A1P5Q5VTE0 462 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RHOUQ7L0Q8 258 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 GLB1L2Q8IW92 636 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 AVL9Q8NBF6 648 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 C16orf52Q8NHV5 167 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CD300LFQ8TDQ1 290 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 NKD1Q969G9 470 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 PNPLA2Q96AD5 504 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ADAD1Q96M93 576 aaKnown RBP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 FOXN4Q96NZ1 517 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 TCF7L1Q9HCS4 588 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 POLE3Q9NRF9 147 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RXFP3Q9NSD7 469 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 KCNK7Q9Y2U2 307 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 M0QYG6 137 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ARPC3O15145 178 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF749O43361 778 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 SCGB1D2O95969 90 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 NME2P22392 152 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 GPR143P51810 404 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 EFNB2P52799 333 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 TAS2R20P59543 309 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 LTBQ06643 244 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 C1orf61Q13536 156 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CD226Q15762 336 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF141Q15928 474 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RNF212Q495C1 297 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF550Q7Z398 422 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 SLC35F3Q8IY50 421 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 DND1Q8IYX4 353 aaKnown RBP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 BCORP1Q8N888 145 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RPS4Y2Q8TD47 263 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 SLC37A2Q8TED4 501 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 HAVCR1Q96D42 359 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ELF4Q99607 663 aaPredicted RBP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 WDR76Q9H967 626 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ZNF337Q9Y3M9 751 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 PCNX3Q9H6A9 2034 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 TRAV18A0A075B6X5 111 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A0J9YY10 115 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 SERINC4A6NH21 518 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 PRF1P14222 555 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 PRKXP51817 358 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CTXN1P60606 82 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 ILF3Q12906 894 aaKnown RBP eCLIP8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 BIVMQ86UB2 503 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 PARGQ86W56 976 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 FAM71CQ8NEG0 241 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR1J4Q8NGS1 313 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR5AK2Q8NH90 309 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 AMELYQ99218 206 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 CLDN16Q9Y5I7 305 aa8.49□□□□□ -1.05
HLA-DOA-201ENST00000229829 A0A1W2PPH5 198 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR2M5A3KFT3 312 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 OR5H14A6NHG9 310 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 C10orf142B7Z368 130 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 FBXO24O75426 580 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 SERPINA5P05154 406 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 CD1AP06126 327 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 MGMTP16455 207 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 RPS10P46783 165 aaKnown RBP8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 F2RL1P55085 397 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 Q499Y3 187 aa8.48□□□□□ -1.05
HLA-DOA-201ENST00000229829 LRRC69Q6ZNQ3 347 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms