RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MAGEA2P43356 314 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 ERVK-25P63136 954 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 TSTQ16762 297 aaKnown RBP12.78□□□□□ -0.36
UPK3A-201ENST00000216211 PCGF3Q3KNV8 242 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 CYBRD1Q53TN4 286 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 SPATA46Q5T0L3 261 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 SLC25A47Q6Q0C1 308 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 ZBTB49Q6ZSB9 765 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 OR51F2Q8NH61 342 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 AKR7LQ8NHP1 331 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 NMD3Q96D46 503 aaKnown RBP12.78□□□□□ -0.36
UPK3A-201ENST00000216211 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 NTN4Q9HB63 628 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 NKIRAS2Q9NYR9 191 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 RAB26Q9ULW5 256 aa12.78□□□□□ -0.36
UPK3A-201ENST00000216211 LOC100509620A0A075B734 347 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 IGHV1-69-2A0A0G2JMI3 117 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 NPIPB13A6NJU9 1138 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 NPIPB4C9JG80 1138 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 IGHV3-13P01766 116 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 THRBP10828 461 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 IFI30P13284 250 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 FUT4P22083 530 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 MPV17P39210 176 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 WNT5AP41221 380 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 PSG4Q00888 419 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 MOGQ16653 247 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 TMEM255AQ5JRV8 349 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 USP51Q70EK9 711 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 IGFN1Q86VF2 1251 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 MEX3DQ86XN8 651 aaKnown RBP12.77□□□□□ -0.37
UPK3A-201ENST00000216211 ZNF101Q8IZC7 436 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 PRRC1Q96M27 445 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 SLC29A1Q99808 456 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 CIB1Q99828 191 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 SMURF2Q9HAU4 748 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 A4GNTQ9UNA3 340 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 HIF3AQ9Y2N7 669 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 CACNG2Q9Y698 323 aa12.77□□□□□ -0.37
UPK3A-201ENST00000216211 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 C5orf49A4QMS7 147 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 DENRO43583 198 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 VENTXO95231 258 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 ZNF682O95780 498 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 MAKP20794 623 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 GCH1P30793 250 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 YAP1P46937 504 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 ZNF81P51508 661 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 CTXN1P60606 82 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 RPL27P61353 136 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 SELENOWP63302 87 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 TEKQ02763 1124 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 ZNF718Q3SXZ3 478 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 FAHD2BQ6P2I3 314 aaPredicted RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 GALNT4Q8N4A0 578 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 IPCEF1Q8WWN9 437 aaPredicted RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 FAHD2AQ96GK7 314 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 WNT5BQ9H1J7 359 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 SAP30LQ9HAJ7 183 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 IL1RAPQ9NPH3 570 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 RHCGQ9UBD6 479 aa12.76□□□□□ -0.37
UPK3A-201ENST00000216211 EIF3KQ9UBQ5 218 aaKnown RBP12.76□□□□□ -0.37
UPK3A-201ENST00000216211 TRAV27A0A087WT01 109 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 TRAV20A0A0B4J274 112 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 CLDN25C9JDP6 229 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 J3KTA2 159 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 SOCS2O14508 198 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 SPRY3O43610 288 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
UPK3A-201ENST00000216211 DYSFO75923 2080 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 PNPP00491 289 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 CST1P01037 141 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 IGHV1-46P01743 117 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 IGHMP01871 453 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 MT-ND5P03915 603 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
UPK3A-201ENST00000216211 NR2C1P13056 603 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 LAP3P28838 519 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 GDI2P50395 445 aaKnown RBP12.75□□□□□ -0.37
UPK3A-201ENST00000216211 MMP15P51511 669 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 RFPL4BQ6ZWI9 263 aa12.75□□□□□ -0.37
UPK3A-201ENST00000216211 VTCN1Q7Z7D3 282 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms