RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PRSS38A1L453 326 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 M0QZK8 103 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 GGCTO75223 188 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 CTSLP07711 333 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 DCAF7P61962 342 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 EXOSC7Q15024 291 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 ETFDHQ16134 617 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 OR5L1Q8NGL2 311 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 CMBLQ96DG6 245 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 NEURL3Q96EH8 262 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 ARHGDIGQ99819 225 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 HCFC1R1Q9NWW0 138 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 IFITM5A6NNB3 132 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 DSCR3O14972 297 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ALOX5APP20292 161 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 PCMT1P22061 227 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ABCD3P28288 659 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 OLIG3Q7RTU3 272 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TOE1Q96GM8 510 aaKnown RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 MS4A10Q96PG2 267 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ASIC5Q9NY37 505 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 IL20Q9NYY1 176 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 EMC9Q9Y3B6 208 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 H0YIV9 168 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 H3BML4 177 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 SLC2A10O95528 541 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 IGHEP01854 428 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 WNT1P04628 370 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 FCER1GP30273 86 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ZNF93P35789 620 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 SRYQ05066 204 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 DEFB133Q30KQ1 61 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 STPG2Q8N412 459 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 UBTD2Q8WUN7 234 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ZNF480Q8WV37 535 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 FGF13Q92913 245 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 FGGYQ96C11 551 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 CHST11Q9NPF2 352 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TMEFF2Q9UIK5 374 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 CRYBG1Q9Y4K1 1723 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 MYH9P35579 1960 aaKnown RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 OR52A4PA6NMU1 304 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 E5RGE8 158 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ZIC2O95409 532 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 ACKR1Q16570 336 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 LKAAEAR1Q8TD35 194 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TMEM174Q8WUU8 243 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 OR5B2Q96R09 309 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 HINT3Q9NQE9 182 aaKnown RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 PLEK2Q9NYT0 353 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 ADAM29Q9UKF5 820 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 NSG2Q9Y328 171 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 A0A0A6YYC8 382 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 I3L1I5 382 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 RAB27BO00194 218 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TAPBPO15533 448 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 LDB3O75112 727 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 TTRP02766 147 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 GCH1P30793 250 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 CEBPEQ15744 281 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 MEP1BQ16820 701 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 AFMIDQ63HM1 303 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 WBP2NLQ6ICG8 309 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 MRPL21Q7Z2W9 205 aaKnown RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 GCNT2Q8N0V5 402 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 NKAIN3Q8N8D7 197 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 OR52R1Q8NGF1 315 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
VCL-201ENST00000211998 SLC46A2Q9BY10 475 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 GHRLQ9UBU3 117 aa9.57□□□□□ -0.88
VCL-201ENST00000211998 SUSD5O60279 629 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 EDN1P05305 212 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 CHRM4P08173 479 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ATP1B3P54709 279 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 OR2B11Q5JQS5 317 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 PLCXD3Q63HM9 321 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 OR8G2PQ6IF36 304 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 DUSP18Q8NEJ0 188 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 OR6K3Q8NGY3 331 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ISOC2Q96AB3 205 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 MAP3K3Q99759 626 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 CLSTN3Q9BQT9 956 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 NECAP2Q9NVZ3 263 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 BET1LQ9NYM9 111 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 NRXN3Q9Y4C0 1643 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 DOT1LQ8TEK3 1739 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 CCDC187A0A096LP49 1063 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 LOC102725191A0A1B0GVB3 256 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 OR7C1O76099 320 aaPredicted RBP9.56□□□□□ -0.88
VCL-201ENST00000211998 B3GALT4O96024 378 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ACAA1P09110 424 aaPredicted RBP9.56□□□□□ -0.88
VCL-201ENST00000211998 PI3P19957 117 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 YPEL5P62699 121 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 DEFB103AP81534 67 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms