RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 F5H5P2 479 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SC5DO75845 299 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 NKX2-2O95096 273 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 AKAIN1P0CW23 69 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SDHAP31040 664 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 HNF4GQ14541 408 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 MLC1Q15049 377 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
CHPF2-201ENST00000035307 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 OR10AC1Q8NH08 325 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 NUDCD2Q8WVJ2 157 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 FRYLO94915 3013 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 CD79AP11912 226 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 RAB3AP20336 220 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 PTGS2P35354 604 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF79Q15937 498 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF770Q6IQ21 691 aaPredicted RBP10.88□□□□□ -0.67
CHPF2-201ENST00000035307 Q6ZTK2 550 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SLC16A9Q7RTY1 509 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 TRAPPC6BQ86SZ2 158 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 D2HGDHQ8N465 521 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SLC43A1O75387 559 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 FARS2O95363 451 aaKnown RBP10.88□□□□□ -0.67
CHPF2-201ENST00000035307 MT-CO3P00414 261 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 RLN2P04090 185 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SERPINA5P05154 406 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 SSR4P51571 173 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 FOXK1P85037 733 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 AIMP2Q13155 320 aaKnown RBP10.88□□□□□ -0.67
CHPF2-201ENST00000035307 RSU1Q15404 277 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 FAM198BQ6UWH4 519 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 ARIH2OSQ8N7S6 290 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 OR1N1Q8NGS0 311 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
CHPF2-201ENST00000035307 MNTQ99583 582 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 ADGRL4Q9HBW9 690 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 ESPL1Q14674 2120 aa10.88□□□□□ -0.67
CHPF2-201ENST00000035307 INTS1Q8N201 2190 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 LOC107986453A0A1B0GWG9 222 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 IFITM5A6NNB3 132 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 LANCL1O43813 399 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 IGHG1P01857 330 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 GABRB1P18505 474 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 RBM34P42696 430 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF136P52737 540 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 RPL27P61353 136 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF117Q03924 483 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 FOXC1Q12948 553 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 DEFB127Q9H1M4 99 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 CAMK2AQ9UQM7 478 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 SLC5A6Q9Y289 635 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PCDHGA1Q9Y5H4 931 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 MYO15AQ9UKN7 3530 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 A0A087WUJ7 227 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PHYHO14832 338 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 IFNA21P01568 189 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 MSL3P1P0C860 447 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 C17orf67Q0P5P2 114 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 GPR155Q7Z3F1 870 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 OR51E1Q8TCB6 317 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 VSTM2LQ96N03 204 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PCED1AQ9H1Q7 454 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 CHRNA9Q9UGM1 479 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 OR52A1Q9UKL2 312 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 NUP50Q9UKX7 468 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 LSM5Q9Y4Y9 91 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 FAM221AA4D161 298 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PMP2P02689 132 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 EPHA4P54764 986 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 TAS2R20P59543 309 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 TMEM244Q5VVB8 128 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PLXDC2Q6UX71 529 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 STAC2Q6ZMT1 411 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 MEX3BQ6ZN04 569 aaKnown RBP10.87□□□□□ -0.67
CHPF2-201ENST00000035307 OR5D14Q8NGL3 314 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 SIGLEC11Q96RL6 698 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 C1orf198Q9H425 327 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 PLEKHJ1Q9NW61 149 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 P4HTMQ9NXG6 502 aa10.87□□□□□ -0.67
CHPF2-201ENST00000035307 AKR1C2P52895 323 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 HERV-K104P61576 105 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 GABREP78334 506 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 AKR1C1Q04828 323 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 IRF3Q14653 427 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 RHBDD2Q6NTF9 364 aa10.86□□□□□ -0.67
CHPF2-201ENST00000035307 STEAP1BQ6NZ63 245 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms