RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CENPAP49450 140 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF133P52736 654 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ROR2Q01974 943 aaKnown RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 C10orf128Q5T292 105 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 SLC25A47Q6Q0C1 308 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 UGT2A3Q6UWM9 527 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 TFAP2EQ6VUC0 442 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 LINGO2Q7L985 606 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ZBTB46Q86UZ6 589 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 UBE2J2Q8N2K1 259 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 POMGNT2Q8NAT1 580 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 BPIFB6Q8NFQ5 453 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ZNRF4Q8WWF5 429 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 KISS1RQ969F8 398 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ZMYND19Q96E35 227 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 RNFT2Q96EX2 444 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 FOXN4Q96NZ1 517 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 AMBNQ9NP70 447 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 SLC7A10Q9NS82 523 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 UPB1Q9UBR1 384 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 PROCRQ9UNN8 238 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 B9D1Q9UPM9 204 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 MOKQ9UQ07 419 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 UGT2A1Q9Y4X1 527 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CASKO14936 926 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 DHHO43323 396 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 XPNPEP2O43895 674 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 APOL3O95236 402 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 HLA-DQA2P01906 255 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 MRPL3P09001 348 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 GAAP10253 952 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 MTNR1AP48039 350 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF84P51523 738 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CHN2P52757 468 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CXCR4P61073 352 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 GLO1Q04760 184 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 GGTLC2Q14390 218 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 ETFDHQ16134 617 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CEACAM16Q2WEN9 425 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 FBXL19-AS1Q494R0 122 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 RBM48Q5RL73 367 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 LINC01590Q5TEZ4 76 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 B3GLCTQ6Y288 498 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 SHFQ7M4L6 423 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CXorf67Q86X51 503 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 GLB1L2Q8IW92 636 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CNN2Q99439 309 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 RHNO1Q9BSD3 238 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 RBM24Q9BX46 236 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 CRLF2Q9HC73 371 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 GPR35Q9HC97 309 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 MALT1Q9UDY8 824 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 WARS2Q9UGM6 360 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 MYRFQ9Y2G1 1151 aa8.24□□□□□ -1.09
PHGDH-228ENST00000641847 COA3Q9Y2R0 106 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 RPL36Q9Y3U8 105 aaKnown RBP8.24□□□□□ -1.09
PHGDH-228ENST00000641847 ARID1AO14497 2285 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 IRGMA1A4Y4 181 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TRIM64A6NGJ6 449 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TVP23AA6NH52 213 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TRIM64BA6NI03 449 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 SELENOFO60613 162 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 SEC14L2O76054 403 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 IL18BPO95998 194 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CGAP01215 116 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CCDC159P0C7I6 412 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CD8BP10966 210 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CRHBPP24387 322 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 LAP3P28838 519 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CDAP32320 146 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 OPRM1P35372 400 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 NAA10P41227 235 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 BLVRAP53004 296 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 SORDQ00796 357 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 POU4F2Q12837 409 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 FAPQ12884 760 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TMED1Q13445 227 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 STK11Q15831 433 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 MEP1BQ16820 701 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 OTPQ5XKR4 325 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 FBXW9Q5XUX1 488 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 AHSA2Q719I0 299 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 ABHD12BQ7Z5M8 362 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 ERI1Q8IV48 349 aaKnown RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 OR10H5Q8NGA6 315 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 OR51G2Q8NGK0 314 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 LGALS12Q96DT0 336 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TEAD3Q99594 435 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 SEC61A2Q9H9S3 476 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms