RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FNDC8Q8TC99 324 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 MAN2C1Q9NTJ4 1040 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 GID8Q9NWU2 228 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 RHCGQ9UBD6 479 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 TIMM10BQ9Y5J6 103 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 SNX13Q9Y5W8 968 aa14.3□□□□□ -0.12
SMN2-216ENST00000638794 A0A1W2PPL8 197 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 ELOVL7A1L3X0 281 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 J3KTA2 159 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 ADH4P08319 380 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 IFNA8P32881 189 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 PCBD1P61457 104 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 HNRNPA0Q13151 305 aaKnown RBP14.29□□□□□ -0.12
SMN2-216ENST00000638794 ENDOGQ14249 297 aaKnown RBP14.29□□□□□ -0.12
SMN2-216ENST00000638794 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 FAM205BPQ63HN1 556 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 CGB2Q6NT52 195 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 USP43Q70EL4 1123 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 C1QL2Q7Z5L3 287 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 VTCN1Q7Z7D3 282 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 C1orf174Q8IYL3 243 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 OFCC1Q8IZS5 231 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 GEMIN6Q8WXD5 167 aaKnown RBP14.29□□□□□ -0.12
SMN2-216ENST00000638794 GAL3ST1Q99999 423 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 EGLN1Q9GZT9 426 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 CYSLTR2Q9NS75 346 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 FGFR1OP2Q9NVK5 253 aa14.29□□□□□ -0.12
SMN2-216ENST00000638794 ISPDA4D126 451 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 A6NIZ1 184 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 H3BSA7 217 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 H7C1C5 153 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 J3QLI3 93 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 SASH3O75995 380 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 SCG5P05408 212 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 H2AFXP16104 143 aaPredicted RBP14.28□□□□□ -0.12
SMN2-216ENST00000638794 MSR1P21757 451 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 LIPAP38571 399 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 GUCA1AP43080 201 aaPredicted RBP14.28□□□□□ -0.12
SMN2-216ENST00000638794 RAP1BP61224 184 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 LCN6P62502 163 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 RAP1AP62834 184 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 PRKCDQ05655 676 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 OAFQ86UD1 273 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 OR13C2Q8NGS9 318 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 LZICQ8WZA0 190 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 FNDC11Q9BVV2 318 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 ELOVL3Q9HB03 270 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 MSL2Q9HCI7 577 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 POLE4Q9NR33 117 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 ARGLU1Q9NWB6 273 aaPredicted RBP14.28□□□□□ -0.12
SMN2-216ENST00000638794 CMTM6Q9NX76 183 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 UBAP1Q9NZ09 502 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 GMPR2Q9P2T1 348 aaKnown RBP14.28□□□□□ -0.12
SMN2-216ENST00000638794 CGGBP1Q9UFW8 167 aaPredicted RBP14.28□□□□□ -0.12
SMN2-216ENST00000638794 KLHL21Q9UJP4 597 aa14.28□□□□□ -0.12
SMN2-216ENST00000638794 EFCAB9A8MZ26 197 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 FFAR1O14842 300 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 IFNW1P05000 195 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 ARHGDIAP52565 204 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 SLC3A1Q07837 685 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 TRAM2Q15035 370 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 SYT9Q86SS6 491 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 PEG10Q86TG7 708 aaKnown RBP14.27□□□□□ -0.13
SMN2-216ENST00000638794 FAM216AQ8WUB2 273 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 RCN3Q96D15 328 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 SLC6A7Q99884 636 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 PLA2G12AQ9BZM1 189 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 EMC7Q9NPA0 242 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 DCAF16Q9NXF7 216 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 ZDHHC8Q9ULC8 765 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 NDRG4Q9ULP0 352 aaKnown RBP14.27□□□□□ -0.13
SMN2-216ENST00000638794 CAPN7Q9Y6W3 813 aa14.27□□□□□ -0.13
SMN2-216ENST00000638794 C12orf71A8MTZ7 269 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 TRIM77I1YAP6 450 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 TIMM8AO60220 97 aaPredicted RBP14.26□□□□□ -0.13
SMN2-216ENST00000638794 ABHD16AO95870 558 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 CD55P08174 381 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
SMN2-216ENST00000638794 GPR4P46093 362 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 SLC9A3P48764 834 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 COMPP49747 757 aaPredicted RBP14.26□□□□□ -0.13
SMN2-216ENST00000638794 LCN2P80188 198 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 PSG7Q13046 419 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 ANKDD1AQ495B1 522 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 ZMAT1Q5H9K5 638 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 MTX3Q5HYI7 312 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 POU5F2Q8N7G0 328 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 NANPQ8TBE9 248 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 ACOT11Q8WXI4 607 aaPredicted RBP14.26□□□□□ -0.13
SMN2-216ENST00000638794 JMJD8Q96S16 334 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 DIRC2Q96SL1 478 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 SUCNR1Q9BXA5 334 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 POFUT1Q9H488 388 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 C7orf69Q9H7B7 122 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 ARMCX1Q9P291 453 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 OPN4Q9UHM6 478 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 ADAM18Q9Y3Q7 739 aa14.26□□□□□ -0.13
SMN2-216ENST00000638794 A0A087WUU8 490 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms