RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GDI2P50395 445 aaKnown RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 SCRN3Q0VDG4 424 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 ENDOGQ14249 297 aaKnown RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 MSMPQ1L6U9 139 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 FAM98BQ52LJ0 330 aaKnown RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 ARL9Q6T311 187 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 GLB1L2Q8IW92 636 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 ZNF786Q8N393 782 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 PAQR4Q8N4S7 273 aaPredicted RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 RASD2Q96D21 266 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 GPA33Q99795 319 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 ZNF416Q9BWM5 594 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 OR52D1Q9H346 318 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 SLCO1C1Q9NYB5 712 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 NDRG4Q9ULP0 352 aaKnown RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 LYVE1Q9Y5Y7 322 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 H3BSA7 217 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 H7C1C5 153 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 KHDRBS3O75525 346 aaKnown RBP19.19■□□□□ 0.66
SF1-220ENST00000626028 LY6HO94772 140 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 IGFBP1P08833 259 aaPredicted RBP19.19■□□□□ 0.66
SF1-220ENST00000626028 FAM157BP0CG42 384 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 DAOP14920 347 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 CTLA4P16410 223 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 TUBG1P23258 451 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 NR4A2P43354 598 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 KLF3P57682 345 aaPredicted RBP19.19■□□□□ 0.66
SF1-220ENST00000626028 LCN6P62502 163 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 MRPS11P82912 194 aaKnown RBP19.19■□□□□ 0.66
SF1-220ENST00000626028 TRAP1Q12931 704 aaKnown RBP19.19■□□□□ 0.66
SF1-220ENST00000626028 MAPK1IP1LQ8NDC0 245 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 SYNPRQ8TBG9 265 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 SYT3Q9BQG1 590 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 WNT5BQ9H1J7 359 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 SYT4Q9H2B2 425 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 TUBG2Q9NRH3 451 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 DUSP13Q9UII6 198 aa19.19■□□□□ 0.66
SF1-220ENST00000626028 SOCS2O14508 198 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 SLC16A7O60669 478 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 CCL2P13500 99 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 MS4A2Q01362 244 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 AQP6Q13520 282 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 KCNMB1Q16558 191 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 TMEM249Q2WGJ8 235 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 PGBD2Q6P3X8 592 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 UBASH3BQ8TF42 649 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 LRGUKQ96M69 825 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 ERMAPQ96PL5 475 aaPredicted RBP19.18■□□□□ 0.66
SF1-220ENST00000626028 ELOVL3Q9HB03 270 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 IL20RAQ9UHF4 553 aa19.18■□□□□ 0.66
SF1-220ENST00000626028 LOC100509620A0A075B734 347 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 A0A1W2PPW3 197 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 C5orf49A4QMS7 147 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 TNFRSF11BO00300 401 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 MT-ND5P03915 603 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 LCKP06239 509 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 DNAL1Q4LDG9 190 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 ZNF620Q6ZNG0 422 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 PTCHD4Q6ZW05 846 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 AKR7LQ8NHP1 331 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 FOXN4Q96NZ1 517 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 NKIRAS2Q9NYR9 191 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 ATPIF1Q9UII2 106 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 MALRD1Q5VYJ5 2156 aa19.17■□□□□ 0.66
SF1-220ENST00000626028 PPP1R3DO95685 299 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 IGHV3-13P01766 116 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 RAP2AP10114 183 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 NOS3P29474 1203 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 CDKN2AP42771 156 aaKnown RBP19.16■□□□□ 0.66
SF1-220ENST00000626028 PCGF3Q3KNV8 242 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 ZNF718Q3SXZ3 478 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 ZNF770Q6IQ21 691 aaPredicted RBP19.16■□□□□ 0.66
SF1-220ENST00000626028 LRP11Q86VZ4 500 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 OR52L1Q8NGH7 329 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 OR4C15Q8NGM1 316 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 OR1J1Q8NGS3 322 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 SNX33Q8WV41 574 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 IPCEF1Q8WWN9 437 aaPredicted RBP19.16■□□□□ 0.66
SF1-220ENST00000626028 IFT27Q9BW83 186 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 NUAK2Q9H093 628 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 IL20Q9NYY1 176 aa19.16■□□□□ 0.66
SF1-220ENST00000626028 CGGBP1Q9UFW8 167 aaPredicted RBP19.16■□□□□ 0.66
SF1-220ENST00000626028 AQP12BA6NM10 295 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 ACOT8O14734 319 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 RENP00797 406 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 CCNOP22674 350 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 LIPAP38571 399 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 ARHGDIAP52565 204 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 GLO1Q04760 184 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 NKPD1Q17RQ9 610 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 MBNL2Q5VZF2 373 aaKnown RBP19.15■□□□□ 0.66
SF1-220ENST00000626028 OR2T5Q6IEZ7 315 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 JAZF1Q86VZ6 243 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 AQP12AQ8IXF9 295 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 ZCCHC24Q8N2G6 241 aaKnown RBP19.15■□□□□ 0.66
SF1-220ENST00000626028 OR2T29Q8NH02 315 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 THTPAQ9BU02 230 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 RACGAP1Q9H0H5 632 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 REEP1Q9H902 201 aa19.15■□□□□ 0.66
SF1-220ENST00000626028 EMC7Q9NPA0 242 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms