RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 FKBP7Q9Y680 259 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 CACNG2Q9Y698 323 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 SAR1BQ9Y6B6 198 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 V9GYQ6 96 aa2.87□□□□□ -1.95
BRCA1-229ENST00000621897 ARID1AO14497 2285 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 A0A0A6YYD4 124 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 A0A0J9YVX5 310 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 A0A1W2PRF3 423 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 A0A1W2PRM7 423 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 FAM231BA6NCW3 169 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SAGE2PA6NJ88 616 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TMEM114B3SHH9 223 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 F5H6K3 240 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MSH4O15457 936 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 PFKFB2O60825 505 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 DIRAS1O95057 198 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 LRATO95237 230 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 NUDT14O95848 222 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 P04436 131 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 IFNW1P05000 195 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 WNT2P09544 360 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OCM2P0CE71 109 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MBL2P11226 248 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ANXA3P12429 323 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 IDO1P14902 403 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF32P17041 273 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 IVDP26440 423 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 HLA-DMAP28067 261 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 PSMB5P28074 263 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MAGEA5P43359 124 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MAGEA6P43360 314 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 GPR1P46091 355 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 RGS6P49758 472 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF133P52736 654 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 RAB4BP61018 213 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OC90Q02509 493 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF33BQ06732 778 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 KLF5Q13887 457 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SPCS2Q15005 226 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TMED2Q15363 201 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 COX19Q49B96 90 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SAMD4BQ5PRF9 694 aaKnown RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 C1orf220Q5T0J3 134 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 APOBEC3HQ6NTF7 200 aaKnown RBP2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ENPP6Q6UWR7 440 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 NIPA1Q7RTP0 329 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR2W3Q7Z3T1 314 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TAC4Q86UU9 113 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 FUNDC1Q8IVP5 155 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 C10orf67Q8IYJ2 551 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TMEM156Q8N614 296 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 CDRT4Q8N9R6 151 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 CCDC71LQ8N9Z2 235 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR2L5Q8NG80 312 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR52I1Q8NGK6 324 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR6Q1Q8NGQ2 317 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR6X1Q8NH79 312 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 DNAJB3Q8WWF6 145 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 CDS1Q92903 461 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MYDGFQ969H8 173 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TIMD4Q96H15 378 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 PPP1R36Q96LQ0 422 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 OR5B2Q96R09 309 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 CIB1Q99828 191 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SLC6A7Q99884 636 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ECSITQ9BQ95 431 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 TIMM29Q9BSF4 260 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 DCUN1D5Q9BTE7 237 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 HES7Q9BYE0 225 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 COMMD4Q9H0A8 199 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SLC25A51Q9H1U9 297 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 NEUROG2Q9H2A3 272 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MIEF1Q9NQG6 463 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 SIGLEC8Q9NYZ4 499 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 MAT2BQ9NZL9 334 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ANAPC7Q9UJX3 599 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ZNF221Q9UK13 617 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ELP1O95163 1332 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ADGRA3Q8IWK6 1321 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 ANKRD30BQ9BXX2 1392 aa2.86□□□□□ -1.95
BRCA1-229ENST00000621897 NACAE9PAV3 2078 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 ERVV-1B6SEH8 477 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 H3BMH7 237 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 M0QXV9 152 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 GOSR2O14653 212 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 PRMT5O14744 637 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-229ENST00000621897 CFLARO15519 480 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 SGCEO43556 437 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 SLC19A2O60779 497 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 PSIP1O75475 530 aaKnown RBP2.85□□□□□ -1.95
BRCA1-229ENST00000621897 SC5DO75845 299 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 IGHG4P01861 327 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 RD3LP0DJH9 198 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 CALM1P0DP23 149 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 CALM2P0DP24 149 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 CALM3P0DP25 149 aa2.85□□□□□ -1.95
BRCA1-229ENST00000621897 HSPD1P10809 573 aaKnown RBP2.85□□□□□ -1.95
BRCA1-229ENST00000621897 H2AFXP16104 143 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms