RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CELF2-AS1Q8N7Q2 184 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 OR51A2Q8NGJ7 313 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 TMEM38AQ9H6F2 299 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 SLC22A11Q9NSA0 550 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 MYH9P35579 1960 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ARPC1BO15143 372 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 CLDN1O95832 211 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF728P0DKX0 622 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 SYT14P1Q58G82 188 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ELP2Q6IA86 826 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 LSRQ86X29 649 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 NKAIN3Q8N8D7 197 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 OR14K1Q8NGZ2 314 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 GINS3Q9BRX5 216 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 OR11A1Q9GZK7 315 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 APC2O95996 2303 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 KIR2DS1A0A191URI9 304 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 LRP5LA4QPB2 252 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 KIR2DS4P43632 304 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 S100A12P80511 92 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 INSM1Q01101 510 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 FZD2Q14332 565 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 KIR2DS1Q14954 304 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 TMEM92Q6UXU6 159 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 BBS1Q8NFJ9 593 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 OR4D9Q8NGE8 314 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ROBO4Q8WZ75 1007 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 FBXW5Q969U6 566 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 MALSU1Q96EH3 234 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 DUS3LQ96G46 650 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 OR2M2Q96R28 347 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ESRP2Q9H6T0 727 aaKnown RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 BCO1Q9HAY6 547 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 GLTPQ9NZD2 209 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 B3GALT5Q9Y2C3 310 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 HDGFL3Q9Y3E1 203 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 IGHV1OR21-1A0A087WYE8 117 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 MSTNO14793 375 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 GLAP06280 429 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 THBS1P07996 1170 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 BCKDHBP21953 392 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 MCCD1P59942 119 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 SHEQ5VZ18 495 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 JMJD6Q6NYC1 403 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 LRRC28Q86X40 367 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF573Q86YE8 665 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 MED30Q96HR3 178 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 LINC00615Q96LM1 132 aaPredicted RBP8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 S1PR3Q99500 378 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 SIAEQ9HAT2 523 aa8.93□□□□□ -0.98
CLTCL1-211ENST00000621271 IGHV3-15A0A0B4J1V0 119 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 M0R135 149 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 XRCC2O43543 280 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 PIP5K1CO60331 668 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ALKBH1Q13686 389 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF628Q5EBL2 1059 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ANKRD34AQ69YU3 496 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 B3GLCTQ6Y288 498 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 GPBAR1Q8TDU6 330 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF707Q96C28 371 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF799Q96GE5 643 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 LCMT2O60294 686 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 LGI1O95970 557 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 CPEP16870 476 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 TBPP20226 339 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 CDONQ4KMG0 1287 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ACER2Q5QJU3 275 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 OLIG3Q7RTU3 272 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 CLDN22Q8N7P3 220 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ZNF321PQ8N8H1 164 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 OR7G2Q8NG99 324 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 RBFOX1Q9NWB1 397 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 SPDEFO95238 335 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 TEAD1P28347 426 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 SUMO3P55854 103 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 MPPED2Q15777 294 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 USP51Q70EK9 711 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 LAX1Q8IWV1 398 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 CMTM2Q8TAZ6 248 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 TCTEX1D2Q8WW35 142 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 GHSRQ92847 366 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 SARGQ9BW04 601 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 NRIP3Q9NQ35 241 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 GPR173Q9NS66 373 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 MEIKINA0A087WXM9 373 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 CXorf51AA0A1B0GTR3 108 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ANKRD61A6NGH8 418 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 K7EQS6 105 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 RAB27BO00194 218 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 BHLHE40O14503 412 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 GFRA3O60609 400 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 IGLV3-25P01717 112 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ETV6P41212 452 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 HBG1P69891 147 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 HBG2P69892 147 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 MFGE8Q08431 387 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 SLC9A3R2Q15599 337 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 ACKR1Q16570 336 aa8.92□□□□□ -0.98
CLTCL1-211ENST00000621271 UBE2NLQ5JXB2 153 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms