RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PIGMQ9H3S5 423 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 EMC7Q9NPA0 242 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 CLEC2DQ9UHP7 191 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 CYB5R1Q9UHQ9 305 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 SNX5Q9Y5X3 404 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 TMEM14AQ9Y6G1 99 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 SVILO95425 2214 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 USP24Q9UPU5 2620 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 POLEQ07864 2286 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 A8MXE2 369 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF670-ZNF695F2Z2N8 137 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 DVL2O14641 736 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ITGA5P08648 1049 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 CST2P09228 141 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SPARCP09486 303 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SMIM18P0DKX4 95 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 OR8G3PP0DMU2 310 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ATP6V1B1P15313 513 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 MYL12AP19105 171 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 PCMT1P22061 227 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 IGHV1-2P23083 117 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 MAP2K4P45985 399 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ETV1P50549 477 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SH3BGRP55822 239 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF85Q03923 595 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 TLE1Q04724 770 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ENDOGQ14249 297 aaKnown RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 P2RY6Q15077 328 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 C9orf135Q5VTT2 229 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 OTPQ5XKR4 325 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SLC18B1Q6NT16 456 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF474Q6S9Z5 364 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 NCCRP1Q6ZVX7 275 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 KCTD8Q6ZWB6 473 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 KCTD20Q7Z5Y7 419 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SYT9Q86SS6 491 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 LIX1LQ8IVB5 337 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SKA3Q8IX90 412 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF843Q8N446 348 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SLC22A24Q8N4F4 322 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SVOPQ8N4V2 548 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF433Q8N7K0 673 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 NANOGP1Q8N7R0 232 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 OR2AJ1Q8NGZ0 328 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 THEM6Q8WUY1 208 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ASB17Q8WXJ9 295 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 BCL2L2Q92843 193 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 BOD1Q96IK1 185 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 MYCBPQ99417 103 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 TBX5Q99593 518 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF416Q9BWM5 594 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 MRPS26Q9BYN8 205 aaKnown RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 OPN3Q9H1Y3 402 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ACOT13Q9NPJ3 140 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 TAS2R16Q9NYV7 291 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 JKAMPQ9P055 326 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 SCOCQ9UIL1 159 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 LAMP5Q9UJQ1 280 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 COPS3Q9UNS2 423 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ERGIC3Q9Y282 383 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 CAB39Q9Y376 341 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-209ENST00000620393 GTF3C1Q12789 2109 aa7.04□□□□□ -1.28
CPNE3-209ENST00000620393 ITPR1Q14643 2758 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 PRRC2CQ9Y520 2896 aaKnown RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 A0A096LPE4 126 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 A0A1W2PPZ6 126 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 TMEM129A0AVI4 362 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 EIF4E1BA6NMX2 242 aaKnown RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 PHYHO14832 338 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 FARS2O95363 451 aaKnown RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 CLPTM1O96005 669 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 PRB1P04280 392 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 TFAP2AP05549 437 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 PSKH1P11801 424 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 B4GALT1P15291 398 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 BMP5P22003 454 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 GNLYP22749 145 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 RPS27P42677 84 aaKnown RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 PCBD1P61457 104 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 HIST1H3AP68431 136 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 ROM1Q03395 351 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 EGR3Q06889 387 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 EIF2B1Q14232 305 aaKnown RBP7.03□□□□□ -1.28
CPNE3-209ENST00000620393 GABRA6Q16445 453 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 CDONQ4KMG0 1287 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 SFRP5Q5T4F7 317 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF684Q5T5D7 378 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 HIST2H3PS2Q5TEC6 136 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 OR7E24Q6IFN5 339 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 TMEM154Q6P9G4 183 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 CORO6Q6QEF8 472 aa7.03□□□□□ -1.28
CPNE3-209ENST00000620393 DEGS2Q6QHC5 323 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms